RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 RAPGEF4Q8WZA2 1011 aa6.11□□□□□ -1.43
VPS29-212ENST00000621131 MAML1Q92585 1016 aa6.11□□□□□ -1.43
VPS29-212ENST00000621131 RSPRY1Q96DX4 576 aa6.11□□□□□ -1.43
VPS29-212ENST00000621131 B3GNT5Q9BYG0 378 aa6.11□□□□□ -1.43
VPS29-212ENST00000621131 GBA2Q9HCG7 927 aaPredicted RBP6.11□□□□□ -1.43
VPS29-212ENST00000621131 XPNPEP3Q9NQH7 507 aa6.11□□□□□ -1.43
VPS29-212ENST00000621131 THRAP3Q9Y2W1 955 aaKnown RBP6.11□□□□□ -1.43
VPS29-212ENST00000621131 USP19O94966 1318 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 POC1B-GALNT4F8VUJ3 575 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 CCER2I3L3R5 266 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 TMF1P82094 1093 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 RNASE12Q5GAN4 147 aaKnown RBP6.1□□□□□ -1.43
VPS29-212ENST00000621131 SWSAP1Q6NVH7 229 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 KIRREL2Q6UWL6 708 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 RAVER1Q8IY67 606 aaKnown RBP6.1□□□□□ -1.43
VPS29-212ENST00000621131 KIAA0319LQ8IZA0 1049 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 GALNT16Q8N428 558 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 GALNT4Q8N4A0 578 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 TMEM171Q8WVE6 324 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 C5orf34Q96MH7 638 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 SNX18Q96RF0 628 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 PRR25Q96S07 402 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 C17orf80Q9BSJ5 609 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 POLR3GLQ9BT43 218 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 DPCDQ9BVM2 203 aaPredicted RBP6.1□□□□□ -1.43
VPS29-212ENST00000621131 TMEM60Q9H2L4 133 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 NRIP3Q9NQ35 241 aa6.1□□□□□ -1.43
VPS29-212ENST00000621131 NRXN1Q9ULB1 1477 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 KIF7Q2M1P5 1343 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 SMIM35A0A1B0GVV1 85 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 TCRBV5S1A1TA0A578 114 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 AP4M1O00189 453 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 TBX3O15119 743 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 EXOC3O60645 756 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 PRKAG1P54619 331 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 E2F1Q01094 437 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 RAB32Q13637 225 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 DAZAP2Q15038 168 aaPredicted RBP6.09□□□□□ -1.43
VPS29-212ENST00000621131 ETFDHQ16134 617 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 LCE1AQ5T7P2 110 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 ZDHHC24Q6UX98 284 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 MPP5Q8N3R9 675 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 C22orf23Q9BZE7 217 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 ZNF518BQ9C0D4 1074 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 ZSCAN32Q9NX65 697 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 KDM5AP29375 1690 aaKnown RBP6.09□□□□□ -1.43
VPS29-212ENST00000621131 TMEM131LA2VDJ0 1609 aa6.09□□□□□ -1.43
VPS29-212ENST00000621131 NEXMIFQ5QGS0 1516 aa6.09□□□□□ -1.44
VPS29-212ENST00000621131 LRRC7Q96NW7 1537 aa6.09□□□□□ -1.44
VPS29-212ENST00000621131 CDK12Q9NYV4 1490 aaPredicted RBP6.09□□□□□ -1.44
VPS29-212ENST00000621131 CYP2D7A0A087X1C5 515 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 PRPF3O43395 683 aaKnown RBP6.08□□□□□ -1.44
VPS29-212ENST00000621131 MOSPD3O75425 235 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 MYCLP12524 364 aaPredicted RBP6.08□□□□□ -1.44
VPS29-212ENST00000621131 FPR3P25089 353 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 SLC7A1P30825 629 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 CCNIQ14094 377 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 DCAF12L1Q5VU92 463 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 CXorf57Q6NSI4 855 aaKnown RBP6.08□□□□□ -1.44
VPS29-212ENST00000621131 SLC2A7Q6PXP3 512 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 DPY19L3Q6ZPD9 716 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 MICU3Q86XE3 530 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 OR56A3Q8NH54 315 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 CIPCQ9C0C6 399 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 PRSS22Q9GZN4 317 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 A1CFQ9NQ94 594 aaKnown RBP6.08□□□□□ -1.44
VPS29-212ENST00000621131 L1RE1Q9UN81 338 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 TBC1D30Q9Y2I9 924 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 PIK3C2GO75747 1445 aa6.08□□□□□ -1.44
VPS29-212ENST00000621131 KTN1Q86UP2 1357 aaKnown RBP6.07□□□□□ -1.44
VPS29-212ENST00000621131 MYO5BQ9ULV0 1848 aa6.07□□□□□ -1.44
VPS29-212ENST00000621131 CAPN8A6NHC0 703 aa6.07□□□□□ -1.44
VPS29-212ENST00000621131 FGAP02671 866 aa6.07□□□□□ -1.44
VPS29-212ENST00000621131 RENBPP51606 427 aa6.07□□□□□ -1.44
VPS29-212ENST00000621131 BCAT1P54687 386 aa6.07□□□□□ -1.44
VPS29-212ENST00000621131 PSG6Q00889 435 aa6.07□□□□□ -1.44
VPS29-212ENST00000621131 CTHRC1Q96CG8 243 aa6.07□□□□□ -1.44
VPS29-212ENST00000621131 SUCLG2Q96I99 432 aa6.07□□□□□ -1.44
VPS29-212ENST00000621131 TRIM5Q9C035 493 aa6.07□□□□□ -1.44
VPS29-212ENST00000621131 PDGFCQ9NRA1 345 aa6.07□□□□□ -1.44
VPS29-212ENST00000621131 ASIC5Q9NY37 505 aa6.07□□□□□ -1.44
VPS29-212ENST00000621131 STK32BQ9NY57 414 aa6.07□□□□□ -1.44
VPS29-212ENST00000621131 DNMT3BQ9UBC3 853 aaKnown RBP6.07□□□□□ -1.44
VPS29-212ENST00000621131 AMFRQ9UKV5 643 aa6.07□□□□□ -1.44
VPS29-212ENST00000621131 ZFYVE9O95405 1425 aa6.07□□□□□ -1.44
VPS29-212ENST00000621131 TNRQ92752 1358 aa6.06□□□□□ -1.44
VPS29-212ENST00000621131 WDR17Q8IZU2 1322 aa6.06□□□□□ -1.44
VPS29-212ENST00000621131 PMPCBO75439 489 aa6.06□□□□□ -1.44
VPS29-212ENST00000621131 TOP3BO95985 862 aaKnown RBP6.06□□□□□ -1.44
VPS29-212ENST00000621131 CHRM5P08912 532 aaPredicted RBP6.06□□□□□ -1.44
VPS29-212ENST00000621131 CYP2A6P11509 494 aaPredicted RBP6.06□□□□□ -1.44
VPS29-212ENST00000621131 GKP32189 559 aa6.06□□□□□ -1.44
VPS29-212ENST00000621131 PTGER1P34995 402 aa6.06□□□□□ -1.44
VPS29-212ENST00000621131 ALDH5A1P51649 535 aaPredicted RBP6.06□□□□□ -1.44
VPS29-212ENST00000621131 SUMO3P55854 103 aaPredicted RBP6.06□□□□□ -1.44
VPS29-212ENST00000621131 CERCAMQ5T4B2 595 aa6.06□□□□□ -1.44
VPS29-212ENST00000621131 BCDIN3DQ7Z5W3 292 aaKnown RBP6.06□□□□□ -1.44
VPS29-212ENST00000621131 SIRT6Q8N6T7 355 aa6.06□□□□□ -1.44
VPS29-212ENST00000621131 C9orf106Q8NAJ2 232 aa6.06□□□□□ -1.44
VPS29-212ENST00000621131 DENND1AQ8TEH3 1009 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms