RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 SNRPFP62306 86 aaKnown RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 MAPK6Q16659 721 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 PTPN20Q4JDL3 420 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 SLFN12LQ6IEE8 588 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 CCSAPQ6IQ19 270 aaPredicted RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 DARS2Q6PI48 645 aaKnown RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 C15orf39Q6ZRI6 1047 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 MTDHQ86UE4 582 aaKnown RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 KBTBD2Q8IY47 623 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 PEX5LQ8IYB4 626 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 KIAA0319LQ8IZA0 1049 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 SCYL3Q8IZE3 742 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 ZCCHC9Q8N567 271 aaKnown RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 WDTC1Q8N5D0 677 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 CCT7Q99832 543 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 HEPHQ9BQS7 1158 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 C17orf75Q9HAS0 396 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 NGRNQ9NPE2 291 aaKnown RBP11.12□□□□□ -0.63
CDH1-214ENST00000621016 GGA3Q9NZ52 723 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 WASF2Q9Y6W5 498 aa11.12□□□□□ -0.63
CDH1-214ENST00000621016 SYNJ2BP-COX16A0A087WUM0 186 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 PRKCBP05771 671 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 GEMIN4P57678 1058 aaKnown RBP11.11□□□□□ -0.63
CDH1-214ENST00000621016 TGFB2P61812 414 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 AMHR2Q16671 573 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 C15orf59Q2T9L4 293 aaPredicted RBP11.11□□□□□ -0.63
CDH1-214ENST00000621016 PUS10Q3MIT2 529 aaKnown RBP11.11□□□□□ -0.63
CDH1-214ENST00000621016 DALRD3Q5D0E6 543 aaKnown RBP11.11□□□□□ -0.63
CDH1-214ENST00000621016 FAM102AQ5T9C2 384 aaPredicted RBP11.11□□□□□ -0.63
CDH1-214ENST00000621016 TRABD2AQ86V40 505 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 LRRC6Q86X45 466 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.11□□□□□ -0.63
CDH1-214ENST00000621016 CXorf38Q8TB03 319 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 SPATA18Q8TC71 538 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 SNX27Q96L92 541 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 MAGEB18Q96M61 343 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 CPXM1Q96SM3 734 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 CGRRF1Q99675 332 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 TMEM109Q9BVC6 243 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 NRBP2Q9NSY0 501 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 COX16Q9P0S2 106 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 PGAP2Q9UHJ9 254 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 XPO7Q9UIA9 1087 aaKnown RBP11.11□□□□□ -0.63
CDH1-214ENST00000621016 SPATA31C2B4DYI2 1134 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 M0QYV0 167 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 RBP3P10745 1247 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 FGFR1P11362 822 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 ATP6V1B1P15313 513 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 TBXAS1P24557 533 aaPredicted RBP11.11□□□□□ -0.63
CDH1-214ENST00000621016 VHLP40337 213 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 CAV1Q03135 178 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 METTL21CQ5VZV1 264 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 DSTYKQ6XUX3 929 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 C12orf29Q8N999 325 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.11□□□□□ -0.63
CDH1-214ENST00000621016 TCP10LQ8TDR4 215 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 CPB2Q96IY4 423 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 SMYD3Q9H7B4 428 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 CYTH4Q9UIA0 394 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 MAD1L1Q9Y6D9 718 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 A8MU76 341 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 ITGB3P05106 788 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 NAMPTP43490 491 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 CD97P48960 835 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 VCPP55072 806 aaKnown RBP11.11□□□□□ -0.63
CDH1-214ENST00000621016 EIF3EP60228 445 aaKnown RBP11.11□□□□□ -0.63
CDH1-214ENST00000621016 LAMTOR4Q0VGL1 99 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 R3HDM1Q15032 1099 aaKnown RBP11.11□□□□□ -0.63
CDH1-214ENST00000621016 TAF1BQ53T94 588 aaPredicted RBP11.11□□□□□ -0.63
CDH1-214ENST00000621016 FKBP1CQ5VVH2 108 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 OR6B2Q6IFH4 312 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 ZNF677Q86XU0 584 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 ALLCQ8N6M5 410 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 C7orf31Q8N865 590 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 BBOF1Q8ND07 529 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 TRPM4Q8TD43 1214 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 MAML1Q92585 1016 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 CDHR1Q96JP9 859 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 MPHOSPH6Q99547 160 aaKnown RBP11.11□□□□□ -0.63
CDH1-214ENST00000621016 TTC1Q99614 292 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 SLC39A3Q9BRY0 314 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 TBC1D10AQ9BXI6 508 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 NIF3L1Q9GZT8 377 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 LIN28AQ9H9Z2 209 aaKnown RBP11.11□□□□□ -0.63
CDH1-214ENST00000621016 AS3MTQ9HBK9 375 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 RXFP1Q9HBX9 757 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 PDLIM7Q9NR12 457 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 COMMD3-BMI1R4GMX3 469 aa11.11□□□□□ -0.63
CDH1-214ENST00000621016 hCG_1818297A0A087WSY0 165 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 ZC3H11AO75152 810 aaKnown RBP eCLIP11.1□□□□□ -0.63
CDH1-214ENST00000621016 GCAP28676 217 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 EIF2B2P49770 351 aaKnown RBP11.1□□□□□ -0.63
CDH1-214ENST00000621016 NEK2P51955 445 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 CDH6P55285 790 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 C1QBPQ07021 282 aaKnown RBP11.1□□□□□ -0.63
CDH1-214ENST00000621016 PTP4A2Q12974 167 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 MTFR1Q15390 333 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 PRR23CQ6ZRP0 262 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 MOB2Q70IA6 237 aa11.1□□□□□ -0.63
CDH1-214ENST00000621016 PHF13Q86YI8 300 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms