RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SDR42E2A6NKP2 422 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 MEI4A8MW99 385 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 SPATA31C2B4DYI2 1134 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 H7C0C1 242 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 ADCY3O60266 1144 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 RNF8O76064 485 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 ATP5OP48047 213 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 WASHC5Q12768 1159 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 LGSNQ5TDP6 509 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 CYP4V2Q6ZWL3 525 aaPredicted RBP20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 ADGRG6Q86SQ4 1221 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 SLC7A3Q8WY07 619 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 PPP2R3CQ969Q6 453 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 CDHR1Q96JP9 859 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 GORASP1Q9BQQ3 440 aa20.32■□□□□ 0.84
PDLIM3-212ENST00000620787 HMX2A2RU54 273 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 RNASEH1O60930 286 aaKnown RBP20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 FKBP6O75344 327 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 AOC1P19801 751 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 GSTT1P30711 240 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 RAP1GAPP47736 663 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 CDH6P55285 790 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 MTMR2Q13614 643 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 HNRNPDQ14103 355 aaKnown RBP20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 CNPY1Q3B7I2 92 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 FAXCQ5TGI0 409 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 ZPBP2Q6X784 338 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 EGFL6Q8IUX8 553 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 RILPQ96NA2 401 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 FRMD8Q9BZ67 464 aaPredicted RBP20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 SDCBP2Q9H190 292 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 COL4A5P29400 1685 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 MED7O43513 233 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 APOEP02649 317 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 OSBPP22059 807 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 PDE1BQ01064 536 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 C1orf228Q6PIY5 440 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 ARHGAP18Q8N392 663 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 SLC4A11Q8NBS3 891 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 GSTCDQ8NEC7 633 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 EBF3Q9H4W6 596 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 STK32BQ9NY57 414 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 SOX13Q9UN79 622 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 BRWD3Q6RI45 1802 aa20.31■□□□□ 0.84
PDLIM3-212ENST00000620787 BIRC5O15392 142 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 C6orf222P0C671 652 aaPredicted RBP20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 CRHR1P34998 444 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 CDK7P50613 346 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 TFAMQ00059 246 aaKnown RBP20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 TUBB3Q13509 450 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 ACAP1Q15027 740 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 RAB6CQ53S08 254 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 AAGABQ6PD74 315 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 ZCCHC23Q6ZST2 131 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 NCSTNQ92542 709 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 RTP4Q96DX8 246 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 MCRS1Q96EZ8 462 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 SPATA16Q9BXB7 569 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 RAB6CQ9H0N0 254 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 S100A14Q9HCY8 104 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 TBC1D30Q9Y2I9 924 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 SLC15A5A6NIM6 579 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 KCNN4O15554 427 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 KRT38O76015 456 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 HOXC6P09630 235 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 STX3Q13277 289 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 FAM47CQ5HY64 1035 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 SH3PXD2AQ5TCZ1 1133 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 UNC5AQ6ZN44 842 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 NDUFAF2Q8N183 169 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 FAM172AQ8WUF8 416 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 ZNF778Q96MU6 729 aa20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 NIFKQ9BYG3 293 aaKnown RBP20.3■□□□□ 0.84
PDLIM3-212ENST00000620787 A0A1B0GVG6 124 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 MSCO60682 206 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 TOM1L1O75674 476 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 TOP3BO95985 862 aaKnown RBP20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 ORC1Q13415 861 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 TFDP2Q14188 446 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 SNRNP48Q6IEG0 339 aaKnown RBP20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 PDSS2Q86YH6 399 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 MTMR14Q8NCE2 650 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 STKLD1Q8NE28 680 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 REPS2Q8NFH8 660 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 RNF217Q8TC41 542 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 TCHPQ9BT92 498 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 DMAP1Q9NPF5 467 aaPredicted RBP20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 ZDHHC7Q9NXF8 308 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 NXF1Q9UBU9 619 aaKnown RBP20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 CPSF3Q9UKF6 684 aaKnown RBP20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 SORCS3Q9UPU3 1222 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 OGTO15294 1046 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 MAGEA6P43360 314 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 SLC25A3Q00325 362 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 CNTN2Q02246 1040 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 CUL3Q13618 768 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 HIC1Q14526 733 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 LIN52Q52LA3 116 aa20.29■□□□□ 0.84
PDLIM3-212ENST00000620787 MROH9Q5TGP6 573 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms