RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 HELZP42694 1942 aaKnown RBP17.02■□□□□ 0.31
CD40-207ENST00000620709 DNAH14Q0VDD8 3507 aa17.02■□□□□ 0.31
CD40-207ENST00000620709 VNN1O95497 513 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 TRIM49P0CI25 452 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 TRIM49CP0CI26 452 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 P4HA1P13674 534 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 CNR2P34972 360 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 KRT9P35527 623 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 FMO5P49326 533 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 MCCD1P59942 119 aaPredicted RBP17.01■□□□□ 0.31
CD40-207ENST00000620709 NOP14P78316 857 aaKnown RBP17.01■□□□□ 0.31
CD40-207ENST00000620709 EXOC3L4Q17RC7 722 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 GBP6Q6ZN66 633 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 ACOT1Q86TX2 421 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 NUP93Q8N1F7 819 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 ZNF397Q8NF99 534 aaPredicted RBP17.01■□□□□ 0.31
CD40-207ENST00000620709 RPLP0P6Q8NHW5 317 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 FBXO32Q969P5 355 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 CEP295NLQ96MC4 621 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 BAG1Q99933 345 aaPredicted RBP17.01■□□□□ 0.31
CD40-207ENST00000620709 TTLL2Q9BWV7 592 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 LSM14BQ9BX40 385 aaKnown RBP17.01■□□□□ 0.31
CD40-207ENST00000620709 EDEM3Q9BZQ6 932 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 RNF38Q9H0F5 515 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 ABHD10Q9NUJ1 306 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 TMEM30AQ9NV96 361 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 CPQQ9Y646 472 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 STX10O60499 249 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 NFATC1O95644 943 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 RETP07949 1114 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 MBL2P11226 248 aaPredicted RBP17.01■□□□□ 0.31
CD40-207ENST00000620709 YWHAQP27348 245 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 PIK3CAP42336 1068 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 PPP3CCP48454 512 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 ZBED6P86452 979 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 LMNB2Q03252 620 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 SPOPLQ6IQ16 392 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 WDR5BQ86VZ2 330 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 TMEM139Q8IV31 216 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 OR8K1Q8NGG5 319 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 KIAA1524Q8TCG1 905 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 TMC2Q8TDI7 906 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 TNIP3Q96KP6 325 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 HHIPQ96QV1 700 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 KCNK16Q96T55 309 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 CRACR2AQ9BSW2 395 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 SDCBP2Q9H190 292 aa17.01■□□□□ 0.31
CD40-207ENST00000620709 CDV3Q9UKY7 258 aaKnown RBP17.01■□□□□ 0.31
CD40-207ENST00000620709 P4HA2O15460 535 aa17■□□□□ 0.31
CD40-207ENST00000620709 ARHGAP6O43182 974 aa17■□□□□ 0.31
CD40-207ENST00000620709 RTN3O95197 1032 aaPredicted RBP17■□□□□ 0.31
CD40-207ENST00000620709 SEC13P55735 322 aa17■□□□□ 0.31
CD40-207ENST00000620709 ZXDBP98169 803 aa17■□□□□ 0.31
CD40-207ENST00000620709 SGSM1Q2NKQ1 1148 aa17■□□□□ 0.31
CD40-207ENST00000620709 TSR1Q2NL82 804 aaKnown RBP17■□□□□ 0.31
CD40-207ENST00000620709 FAM35AQ86V20 835 aa17■□□□□ 0.31
CD40-207ENST00000620709 FAM160A2Q8N612 972 aaPredicted RBP17■□□□□ 0.31
CD40-207ENST00000620709 DNAJC7Q99615 494 aa17■□□□□ 0.31
CD40-207ENST00000620709 PLCB1Q9NQ66 1216 aa17■□□□□ 0.31
CD40-207ENST00000620709 CFAP97Q9P2B7 532 aa17■□□□□ 0.31
CD40-207ENST00000620709 CHORDC1Q9UHD1 332 aaPredicted RBP17■□□□□ 0.31
CD40-207ENST00000620709 DYNC1LI1Q9Y6G9 523 aaKnown RBP17■□□□□ 0.31
CD40-207ENST00000620709 PRR5-ARHGAP8B1AHC4 643 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 RNF225M0QZC1 329 aaPredicted RBP16.99■□□□□ 0.31
CD40-207ENST00000620709 AXIN1O15169 862 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 AP1G2O75843 785 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 CCDC130P13994 396 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 PFKLP17858 780 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 FECHP22830 423 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 ARHGAP8P85298 464 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 CETN1Q12798 172 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 FBXO43Q4G163 708 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 SV2AQ7L0J3 742 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 SCAMP5Q8TAC9 235 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 VRTNQ9H8Y1 702 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 KRT82Q9NSB4 513 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 RALGAPA1Q6GYQ0 2036 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 MYH10P35580 1976 aa16.99■□□□□ 0.31
CD40-207ENST00000620709 MED19A0JLT2 244 aaPredicted RBP16.98■□□□□ 0.31
CD40-207ENST00000620709 EPHB6O15197 1021 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 PMM2O15305 246 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 ZNF500O60304 480 aaPredicted RBP16.98■□□□□ 0.31
CD40-207ENST00000620709 RPP40O75818 363 aaKnown RBP16.98■□□□□ 0.31
CD40-207ENST00000620709 HLA-DRAP01903 254 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 SDHBP21912 280 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 TGM1P22735 817 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 PON1P27169 355 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 NDST1P52848 882 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 CLDN10P78369 228 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 SLC7A9P82251 487 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 ZACNQ401N2 412 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 CBWD6Q4V339 395 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 CBWD3Q5JTY5 395 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 CBWD5Q5RIA9 395 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 CACNA2D4Q7Z3S7 1137 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 PDZD8Q8NEN9 1154 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 JAKMIP2Q96AA8 810 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 SMARCD1Q96GM5 515 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 NACA2Q9H009 215 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 DMAP1Q9NPF5 467 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms