RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 USP17L22D6RA61 530 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 USP17L17D6RBQ6 530 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 USP17L19D6RCP7 530 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 USP17L20D6RJB6 530 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 ABCB1P08183 1280 aaPredicted RBP10.75□□□□□ -0.69
VPS11-207ENST00000620429 ZNF200P98182 395 aaPredicted RBP10.75□□□□□ -0.69
VPS11-207ENST00000620429 USP17L24Q0WX57 530 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 MOGQ16653 247 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 DACT2Q5SW24 774 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 LMBRD2Q68DH5 695 aaPredicted RBP10.75□□□□□ -0.69
VPS11-207ENST00000620429 USP17L6PQ6QN14 398 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 CENPUQ71F23 418 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 AMIGO2Q86SJ2 522 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 TMEM126BQ8IUX1 230 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 PPM1KQ8N3J5 372 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 POU5F2Q8N7G0 328 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 RNF169Q8NCN4 708 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 TSPAN14Q8NG11 270 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 RAB3IL1Q8TBN0 382 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 HCAR2Q8TDS4 363 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 ACMSDQ8TDX5 336 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 SLC26A7Q8TE54 656 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 TRUB1Q8WWH5 349 aaKnown RBP10.75□□□□□ -0.69
VPS11-207ENST00000620429 SLC2A11Q9BYW1 496 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 CDH19Q9H159 772 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 VPS11Q9H270 941 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 IKZF4Q9H2S9 585 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 GINM1Q9NU53 330 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 VPS51Q9UID3 782 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 PCDHGA11Q9Y5H2 935 aa10.75□□□□□ -0.69
VPS11-207ENST00000620429 H0YIN7 160 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 IDH3BO43837 385 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 POLR2MP0CAP2 368 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 GCAP28676 217 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 KCNJ1P48048 391 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 HSPA13P48723 471 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 ARL4CP56559 192 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 SEL1L2Q5TEA6 688 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 TWF2Q6IBS0 349 aaKnown RBP10.74□□□□□ -0.69
VPS11-207ENST00000620429 TRIML2Q8N7C3 387 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 TMIGD2Q96BF3 282 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 TAMM41Q96BW9 452 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 CNBD2Q96M20 576 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 NLRP4Q96MN2 994 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 NAP1L4Q99733 375 aaKnown RBP10.74□□□□□ -0.69
VPS11-207ENST00000620429 C2orf49Q9BVC5 232 aaPredicted RBP10.74□□□□□ -0.69
VPS11-207ENST00000620429 C6orf203Q9P0P8 240 aaPredicted RBP10.74□□□□□ -0.69
VPS11-207ENST00000620429 EMSYQ7Z589 1322 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 KPNA4O00629 521 aaPredicted RBP10.74□□□□□ -0.69
VPS11-207ENST00000620429 CYP26A1O43174 497 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 GDF11O95390 407 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 HLA-DOAP06340 250 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 ENO1P06733 434 aaKnown RBP10.74□□□□□ -0.69
VPS11-207ENST00000620429 RAG1P15918 1043 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 JAK1P23458 1154 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 JAG1P78504 1218 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 KRT76Q01546 638 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 IFITM2Q01629 132 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 FOCADQ5VW36 1801 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 FRA10AC1Q70Z53 315 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 PODNQ7Z5L7 613 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 UBE2Q1Q7Z7E8 422 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 GALNT4Q8N4A0 578 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 CATSPER1Q8NEC5 780 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 ZDHHC15Q96MV8 337 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 TSSK1BQ9BXA7 367 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 HIPK3Q9H422 1215 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 RPAP3Q9H6T3 665 aaPredicted RBP10.74□□□□□ -0.69
VPS11-207ENST00000620429 LRRC19Q9H756 370 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 MANSC1Q9H8J5 431 aa10.74□□□□□ -0.69
VPS11-207ENST00000620429 PSME4Q14997 1843 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 UTRNP46939 3433 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 MYOCOSA0A1B0GUC4 107 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 SFI1A8K8P3 1242 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 SORBS3O60504 671 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 UGT1A9O60656 530 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 LRRN2O75325 713 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 CRYZL1O95825 349 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 CCDC130P13994 396 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 UGT1A6P19224 532 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 UGT1A1P22309 533 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 UGT1A4P22310 534 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 IVDP26440 423 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 UGT1A3P35503 534 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 UGT1A5P35504 534 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 PSMC2P35998 433 aaKnown RBP10.73□□□□□ -0.69
VPS11-207ENST00000620429 CPOXP36551 454 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 FMO5P49326 533 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 HADHBP55084 474 aaKnown RBP10.73□□□□□ -0.69
VPS11-207ENST00000620429 CHRNEQ04844 493 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 MESDQ14696 234 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 OXA1LQ15070 435 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 SYDE1Q6ZW31 735 aaPredicted RBP10.73□□□□□ -0.69
VPS11-207ENST00000620429 CCDC89Q8N998 374 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 TTC13Q8NBP0 860 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 GIPC2Q8TF65 315 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 PSPC1Q8WXF1 523 aaKnown RBP10.73□□□□□ -0.69
VPS11-207ENST00000620429 THAP11Q96EK4 314 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 TCF12Q99081 682 aa10.73□□□□□ -0.69
VPS11-207ENST00000620429 ZSWIM1Q9BR11 485 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms