RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 PAN2Q504Q3 1202 aaKnown RBP19.85■□□□□ 0.77
PSPC1-206ENST00000619300 PCGF5Q86SE9 256 aa19.85■□□□□ 0.77
PSPC1-206ENST00000619300 ARFGAP2Q8N6H7 521 aa19.85■□□□□ 0.77
PSPC1-206ENST00000619300 PCDH19Q8TAB3 1148 aa19.85■□□□□ 0.77
PSPC1-206ENST00000619300 TLCD1Q96CP7 247 aa19.85■□□□□ 0.77
PSPC1-206ENST00000619300 FAF2Q96CS3 445 aa19.85■□□□□ 0.77
PSPC1-206ENST00000619300 RBM15Q96T37 977 aaKnown RBP eCLIP19.85■□□□□ 0.773e-7■■■■□ 24.9
PSPC1-206ENST00000619300 SMOQ99835 787 aa19.85■□□□□ 0.77
PSPC1-206ENST00000619300 RTP3Q9BQQ7 232 aa19.85■□□□□ 0.77
PSPC1-206ENST00000619300 ROPN1BQ9BZX4 212 aaPredicted RBP19.85■□□□□ 0.77
PSPC1-206ENST00000619300 ROPN1Q9HAT0 212 aaPredicted RBP19.85■□□□□ 0.77
PSPC1-206ENST00000619300 ERICH4A6NGS2 130 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 APOL1O14791 398 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 FBXO21O94952 628 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 EOMESO95936 686 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 TGM2P21980 687 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 NOS2P35228 1153 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 BRCC3P46736 316 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 MAGOHP61326 146 aaKnown RBP19.84■□□□□ 0.77
PSPC1-206ENST00000619300 MBTPS1Q14703 1052 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 ARHGEF6Q15052 776 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 DCAF6Q58WW2 860 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 PPP6R3Q5H9R7 873 aaPredicted RBP19.84■□□□□ 0.77
PSPC1-206ENST00000619300 SLC9A4Q6AI14 798 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 DARS2Q6PI48 645 aaKnown RBP19.84■□□□□ 0.77
PSPC1-206ENST00000619300 C1orf228Q6PIY5 440 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 DCLRE1AQ6PJP8 1040 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 LEKR1Q6ZMV7 388 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 FAM71DQ8N9W8 422 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 ACBD6Q9BR61 282 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 NINJ2Q9NZG7 142 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 DSEQ9UL01 958 aa19.84■□□□□ 0.77
PSPC1-206ENST00000619300 C9IYK1 514 aa19.83■□□□□ 0.77
PSPC1-206ENST00000619300 M0QZQ0 153 aa19.83■□□□□ 0.77
PSPC1-206ENST00000619300 RASGRF2O14827 1237 aa19.83■□□□□ 0.77
PSPC1-206ENST00000619300 RPL22P35268 128 aaKnown RBP19.83■□□□□ 0.77
PSPC1-206ENST00000619300 BCAR1P56945 870 aa19.83■□□□□ 0.77
PSPC1-206ENST00000619300 ROR1Q01973 937 aa19.83■□□□□ 0.77
PSPC1-206ENST00000619300 SLC24A5Q71RS6 500 aa19.83■□□□□ 0.77
PSPC1-206ENST00000619300 NT5C3BQ969T7 300 aa19.83■□□□□ 0.77
PSPC1-206ENST00000619300 KCNK16Q96T55 309 aa19.83■□□□□ 0.77
PSPC1-206ENST00000619300 DHX35Q9H5Z1 703 aaKnown RBP19.83■□□□□ 0.77
PSPC1-206ENST00000619300 CALCOCO1Q9P1Z2 691 aa19.83■□□□□ 0.77
PSPC1-206ENST00000619300 AP4E1Q9UPM8 1137 aa19.83■□□□□ 0.77
PSPC1-206ENST00000619300 SHOC2Q9UQ13 582 aa19.83■□□□□ 0.77
PSPC1-206ENST00000619300 DCDC2CA8MYV0 355 aa19.83■□□□□ 0.76
PSPC1-206ENST00000619300 FKTNO75072 461 aa19.83■□□□□ 0.76
PSPC1-206ENST00000619300 GRK4P32298 578 aa19.83■□□□□ 0.76
PSPC1-206ENST00000619300 MAGEA4P43358 317 aa19.83■□□□□ 0.76
PSPC1-206ENST00000619300 VEGFBP49765 207 aa19.83■□□□□ 0.76
PSPC1-206ENST00000619300 SULT1E1P49888 294 aa19.83■□□□□ 0.76
PSPC1-206ENST00000619300 GNGT1P63211 74 aa19.83■□□□□ 0.76
PSPC1-206ENST00000619300 FAM171BQ6P995 826 aa19.83■□□□□ 0.76
PSPC1-206ENST00000619300 ZC3H18Q86VM9 953 aaKnown RBP19.83■□□□□ 0.76
PSPC1-206ENST00000619300 CCDC185Q8N715 623 aa19.83■□□□□ 0.76
PSPC1-206ENST00000619300 ZMIZ2Q8NF64 920 aa19.83■□□□□ 0.76
PSPC1-206ENST00000619300 RSPH1Q8WYR4 309 aa19.83■□□□□ 0.76
PSPC1-206ENST00000619300 FARP1Q9Y4F1 1045 aaPredicted RBP19.83■□□□□ 0.76
PSPC1-206ENST00000619300 ARVCFO00192 962 aa19.82■□□□□ 0.76
PSPC1-206ENST00000619300 RGS16O15492 202 aaPredicted RBP19.82■□□□□ 0.76
PSPC1-206ENST00000619300 CTCFP49711 727 aaPredicted RBP19.82■□□□□ 0.76
PSPC1-206ENST00000619300 FAM189BP81408 668 aa19.82■□□□□ 0.76
PSPC1-206ENST00000619300 RAB41Q5JT25 222 aa19.82■□□□□ 0.76
PSPC1-206ENST00000619300 GLB1LQ6UWU2 654 aa19.82■□□□□ 0.76
PSPC1-206ENST00000619300 EPS8L3Q8TE67 593 aaKnown RBP19.82■□□□□ 0.76
PSPC1-206ENST00000619300 HASPINQ8TF76 798 aa19.82■□□□□ 0.76
PSPC1-206ENST00000619300 SMARCD1Q96GM5 515 aa19.82■□□□□ 0.76
PSPC1-206ENST00000619300 SLC2A13Q96QE2 648 aa19.82■□□□□ 0.76
PSPC1-206ENST00000619300 NPY6RQ99463 290 aa19.82■□□□□ 0.76
PSPC1-206ENST00000619300 ULBP1Q9BZM6 244 aa19.82■□□□□ 0.76
PSPC1-206ENST00000619300 POPDC2Q9HBU9 364 aa19.82■□□□□ 0.76
PSPC1-206ENST00000619300 CNGB3Q9NQW8 809 aa19.82■□□□□ 0.76
PSPC1-206ENST00000619300 MTMR10Q9NXD2 777 aa19.82■□□□□ 0.76
PSPC1-206ENST00000619300 SMIM23A6NLE4 172 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 H7C0C1 242 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 NRP1O14786 923 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 CYP2F1P24903 491 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 RDXP35241 583 aaKnown RBP19.81■□□□□ 0.76
PSPC1-206ENST00000619300 ATP5OP48047 213 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 RABGGTBP53611 331 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 CACNA2D1P54289 1103 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 PPP2R2AP63151 447 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 TTC19Q6DKK2 380 aaPredicted RBP19.81■□□□□ 0.76
PSPC1-206ENST00000619300 BNIPLQ7Z465 357 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 PPIL6Q8IXY8 311 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 ZNF296Q8WUU4 475 aaPredicted RBP19.81■□□□□ 0.76
PSPC1-206ENST00000619300 PRCCQ92733 491 aaPredicted RBP19.81■□□□□ 0.76
PSPC1-206ENST00000619300 MAGEB5Q9BZ81 275 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 NRDE2Q9H7Z3 1164 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 CSNK1G1Q9HCP0 422 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 TMEM30AQ9NV96 361 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 STAP1Q9ULZ2 295 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 HEY1Q9Y5J3 304 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 PRMT2P55345 433 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 DAOAP59103 153 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 INTS6LQ5JSJ4 861 aaKnown RBP19.81■□□□□ 0.76
PSPC1-206ENST00000619300 SYPL2Q5VXT5 272 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 LRRC31Q6UY01 552 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 FAM131BQ86XD5 332 aa19.81■□□□□ 0.76
PSPC1-206ENST00000619300 PSTKQ8IV42 348 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms