RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 KLK7P49862 253 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 ZNF165P49910 485 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 DAOAP59103 153 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 YWHAGP61981 247 aaKnown RBP eCLIP8.67□□□□□ -1.02
NEK3-209ENST00000618856 TNK2Q07912 1038 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 ADIGQ0VDE8 80 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 IFRD2Q12894 506 aaPredicted RBP8.67□□□□□ -1.02
NEK3-209ENST00000618856 CCINQ13939 588 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 DRAP1Q14919 205 aaPredicted RBP8.67□□□□□ -1.02
NEK3-209ENST00000618856 ARHGAP44Q17R89 818 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 ITPRIPL2Q3MIP1 535 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 ZSCAN23Q3MJ62 389 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 TRIM68Q6AZZ1 485 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 DENND1BQ6P3S1 775 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 TXNDC11Q6PKC3 985 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 Q6ZNB5 142 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 TPRG1Q6ZUI0 275 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 FLCNQ8NFG4 579 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 WBP2Q969T9 261 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 OTUB2Q96DC9 234 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 CDK5RAP1Q96SZ6 601 aaKnown RBP8.67□□□□□ -1.02
NEK3-209ENST00000618856 PRRX2Q99811 253 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 ULBP1Q9BZM6 244 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 FOXQ1Q9C009 403 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 LINC00597Q9H2U6 94 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 MFSD1Q9H3U5 465 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 ECT2Q9H8V3 914 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 SIT1Q9Y3P8 196 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 MYO16Q9Y6X6 1858 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 USP34Q70CQ2 3546 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 A0A0A0MRY4 1105 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 A0A1B0GTH6 734 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 FAM170BA6NMN3 283 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 M0QYV0 167 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 GFRA2O00451 464 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 SLC9A3R1O14745 358 aaPredicted RBP8.66□□□□□ -1.02
NEK3-209ENST00000618856 FBXO21O94952 628 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 PNMA6AP0CW24 399 aaPredicted RBP8.66□□□□□ -1.02
NEK3-209ENST00000618856 MBL2P11226 248 aaPredicted RBP8.66□□□□□ -1.02
NEK3-209ENST00000618856 CHRM1P11229 460 aaPredicted RBP8.66□□□□□ -1.02
NEK3-209ENST00000618856 KRT5P13647 590 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 ARSAP15289 507 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 CYP11B1P15538 503 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 CD72P21854 359 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 GJA4P35212 333 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 ACADSBP45954 432 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 SOX9P48436 509 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 CLCN6P51797 869 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 BPIFB4P59827 614 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 PTK2Q05397 1052 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 TCF15Q12870 199 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 EIF4EBP2Q13542 120 aaPredicted RBP8.66□□□□□ -1.02
NEK3-209ENST00000618856 NR1I3Q14994 352 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 SYCP1Q15431 976 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 TMEM196Q5HYL7 178 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 FKBP15Q5T1M5 1219 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 BSPRYQ5W0U4 402 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 MSANTD2Q6P1R3 559 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 RHBDF2Q6PJF5 856 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 TADA2BQ86TJ2 420 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 SLC47A2Q86VL8 602 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 FAM217AQ8IXS0 508 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 PRSS33Q8NF86 280 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 CSGALNACT1Q8TDX6 532 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 FAM3CQ92520 227 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 ATP2A3Q93084 1043 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 IER2Q9BTL4 223 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 LSM14BQ9BX40 385 aaKnown RBP8.66□□□□□ -1.02
NEK3-209ENST00000618856 EBF3Q9H4W6 596 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 LRRC4Q9HBW1 653 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 CBX8Q9HC52 389 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 DUS2Q9NX74 493 aaKnown RBP8.66□□□□□ -1.02
NEK3-209ENST00000618856 CFAP97Q9P2B7 532 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 TBC1D14Q9P2M4 693 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 DNMT3LQ9UJW3 386 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 STOML2Q9UJZ1 356 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 NAGPAQ9UK23 515 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 MRPS17Q9Y2R5 130 aaKnown RBP8.66□□□□□ -1.02
NEK3-209ENST00000618856 FARP1Q9Y4F1 1045 aaPredicted RBP8.66□□□□□ -1.02
NEK3-209ENST00000618856 WNT6Q9Y6F9 365 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 CACNA1HO95180 2353 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 VPS13AQ96RL7 3174 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 MYH10P35580 1976 aa8.66□□□□□ -1.02
NEK3-209ENST00000618856 A0A1W2PQC6 194 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 PAPSS1O43252 624 aaPredicted RBP8.65□□□□□ -1.02
NEK3-209ENST00000618856 THAP12O43422 761 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 NFATC1O95644 943 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 ABL1P00519 1130 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 IGLV3-27P01718 113 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 KLKB1P03952 638 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 CYP17A1P05093 508 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 TPM2P07951 284 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 RALAP11233 206 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 EIF2DP41214 584 aaKnown RBP8.65□□□□□ -1.02
NEK3-209ENST00000618856 PDCLQ13371 301 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 TRIP4Q15650 581 aaPredicted RBP8.65□□□□□ -1.02
NEK3-209ENST00000618856 CC2D1AQ6P1N0 951 aaPredicted RBP8.65□□□□□ -1.02
NEK3-209ENST00000618856 NOP9Q86U38 636 aaKnown RBP8.65□□□□□ -1.02
NEK3-209ENST00000618856 ZNF677Q86XU0 584 aa8.65□□□□□ -1.02
NEK3-209ENST00000618856 ETFBKMTQ8IXQ9 262 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms