RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 C18orf25Q96B23 403 aaPredicted RBP14.39□□□□□ -0.11
CIITA-213ENST00000618327 PPWD1Q96BP3 646 aaKnown RBP14.39□□□□□ -0.11
CIITA-213ENST00000618327 POPDC2Q9HBU9 364 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 LMCD1Q9NZU5 365 aa14.39□□□□□ -0.11
CIITA-213ENST00000618327 SCN7AQ01118 1682 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 A0A0G2JND7 137 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 ZSCAN5CA6NGD5 496 aaPredicted RBP14.38□□□□□ -0.11
CIITA-213ENST00000618327 NEMP1O14524 444 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 CCR1P32246 355 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 ANKRD52Q8NB46 1076 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 MRPS31Q92665 395 aaKnown RBP14.38□□□□□ -0.11
CIITA-213ENST00000618327 DACT3Q96B18 629 aaPredicted RBP14.38□□□□□ -0.11
CIITA-213ENST00000618327 DEFB118Q96PH6 123 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 PCDHB18PQ96TA0 734 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 CYP4F11Q9HBI6 524 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 TLR8Q9NR97 1041 aaKnown RBP14.38□□□□□ -0.11
CIITA-213ENST00000618327 SMG5Q9UPR3 1016 aaKnown RBP14.38□□□□□ -0.11
CIITA-213ENST00000618327 UBA6A0AVT1 1052 aaPredicted RBP14.38□□□□□ -0.11
CIITA-213ENST00000618327 PDE2AO00408 941 aaPredicted RBP14.38□□□□□ -0.11
CIITA-213ENST00000618327 ETFBP38117 255 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 STX1BP61266 288 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 MORF4L2Q15014 288 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 DENND5BQ6ZUT9 1274 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 NUDCD3Q8IVD9 361 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 C12orf29Q8N999 325 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 CHMP6Q96FZ7 201 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 HAUS8Q9BT25 410 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 TUBGCP4Q9UGJ1 667 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 ZNF263O14978 683 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 ANXA9O76027 345 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 LTFP02788 710 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 USP17L7P0C7H9 530 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 TGM2P21980 687 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 CCL23P55773 120 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 GRB14Q14449 540 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 TMC7Q7Z402 723 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 C1orf127Q8N9H9 656 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 ADAM32Q8TC27 787 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 MORF4L1Q9UBU8 362 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 CDH9Q9ULB4 789 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 PPP1R37O75864 691 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 MDH1P40925 334 aaKnown RBP14.38□□□□□ -0.11
CIITA-213ENST00000618327 SERPINB9P50453 376 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 JAM2P57087 298 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 FSTL1Q12841 308 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 ZNF792Q3KQV3 632 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 PIGZQ86VD9 579 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 NLRP14Q86W24 1093 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 TSC22D3Q99576 134 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 PCDH9Q9HC56 1237 aa14.38□□□□□ -0.11
CIITA-213ENST00000618327 AMHP03971 560 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 UGP2Q16851 508 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 FAM183BPQ6ZVS7 135 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 C4orf33Q8N1A6 199 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 NPLOC4Q8TAT6 608 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 STAMBPL1Q96FJ0 436 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 RAB21Q9UL25 225 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.37□□□□□ -0.11
CIITA-213ENST00000618327 TTC4O95801 387 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 CKMP06732 381 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 MBL2P11226 248 aaPredicted RBP14.37□□□□□ -0.11
CIITA-213ENST00000618327 GRIK3Q13003 919 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 PTK7Q13308 1070 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 ZNF177Q13360 481 aaPredicted RBP14.37□□□□□ -0.11
CIITA-213ENST00000618327 TAS2R42Q7RTR8 314 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 CNPY4Q8N129 248 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 SLC25A41Q8N5S1 370 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 EIF2AQ9BY44 585 aaKnown RBP14.37□□□□□ -0.11
CIITA-213ENST00000618327 SARS2Q9NP81 518 aaKnown RBP14.37□□□□□ -0.11
CIITA-213ENST00000618327 ENTPD7Q9NQZ7 604 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 MYH6P13533 1939 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 AKAP11Q9UKA4 1901 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 E5RI56 91 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 YWHAQP27348 245 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 ZNF143P52747 638 aaPredicted RBP14.37□□□□□ -0.11
CIITA-213ENST00000618327 EPHB3P54753 998 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 ENPEPQ07075 957 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 C15orf59Q2T9L4 293 aaPredicted RBP14.37□□□□□ -0.11
CIITA-213ENST00000618327 RIBC1Q8N443 379 aaPredicted RBP14.37□□□□□ -0.11
CIITA-213ENST00000618327 LRGUKQ96M69 825 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 MRPL45Q9BRJ2 306 aaKnown RBP14.37□□□□□ -0.11
CIITA-213ENST00000618327 PADI3Q9ULW8 664 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 TIAM2Q8IVF5 1701 aa14.37□□□□□ -0.11
CIITA-213ENST00000618327 PMPCBO75439 489 aa14.36□□□□□ -0.11
CIITA-213ENST00000618327 PAX3P23760 479 aa14.36□□□□□ -0.11
CIITA-213ENST00000618327 RPL7AP62424 266 aaKnown RBP14.36□□□□□ -0.11
CIITA-213ENST00000618327 LDLRAD1Q5T700 205 aa14.36□□□□□ -0.11
CIITA-213ENST00000618327 LRRC38Q5VT99 294 aa14.36□□□□□ -0.11
CIITA-213ENST00000618327 AADACL2Q6P093 401 aa14.36□□□□□ -0.11
CIITA-213ENST00000618327 LINC00523Q86TU6 105 aa14.36□□□□□ -0.11
CIITA-213ENST00000618327 PTPRN2Q92932 1015 aa14.36□□□□□ -0.11
CIITA-213ENST00000618327 ALKBH8Q96BT7 664 aaKnown RBP14.36□□□□□ -0.11
CIITA-213ENST00000618327 MRPL46Q9H2W6 279 aaKnown RBP14.36□□□□□ -0.11
CIITA-213ENST00000618327 GOLGA2P5Q9HBQ8 144 aa14.36□□□□□ -0.11
CIITA-213ENST00000618327 EPS15L1Q9UBC2 864 aa14.36□□□□□ -0.11
CIITA-213ENST00000618327 CCDC195A0A1B0GUA6 201 aa14.36□□□□□ -0.11
CIITA-213ENST00000618327 MAP3K7O43318 606 aa14.36□□□□□ -0.11
CIITA-213ENST00000618327 ARHGAP15Q53QZ3 475 aa14.36□□□□□ -0.11
CIITA-213ENST00000618327 RABGAP1LQ5R372 815 aa14.36□□□□□ -0.11
CIITA-213ENST00000618327 TRIM67Q6ZTA4 783 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms