RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 TNFAIP3P21580 790 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 SOX5P35711 763 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 HSPA13P48723 471 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 CD300CQ08708 224 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 OASLQ15646 514 aaKnown RBP11.99□□□□□ -0.49
TP53-222ENST00000617185 SPDYE2Q495Y8 402 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 ANKS1BQ7Z6G8 1248 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 RTKN2Q8IZC4 609 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 TCP10LQ8TDR4 215 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 REEP2Q9BRK0 252 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 SMYD3Q9H7B4 428 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 ERVK-11Q9UQG0 969 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 BCS1LQ9Y276 419 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 FAM237BA0A1B0GVD1 139 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 CLIC2O15247 247 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 FBXO21O94952 628 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 PARNO95453 639 aaKnown RBP11.99□□□□□ -0.49
TP53-222ENST00000617185 XRCC5P13010 732 aaKnown RBP11.99□□□□□ -0.49
TP53-222ENST00000617185 CPOXP36551 454 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 PUS10Q3MIT2 529 aaKnown RBP11.99□□□□□ -0.49
TP53-222ENST00000617185 RARS2Q5T160 578 aaKnown RBP11.99□□□□□ -0.49
TP53-222ENST00000617185 GALNT4Q8N4A0 578 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 RNF169Q8NCN4 708 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 TMIGD2Q96BF3 282 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 RUSC1Q9BVN2 902 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 RETREG1Q9H6L5 497 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 TMX2Q9Y320 296 aa11.99□□□□□ -0.49
TP53-222ENST00000617185 TTC34A8MYJ7 566 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 ZNF701M0R085 212 aaPredicted RBP11.98□□□□□ -0.49
TP53-222ENST00000617185 FSCN2O14926 492 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 ARP10275 920 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 TCEA1P23193 301 aaKnown RBP11.98□□□□□ -0.49
TP53-222ENST00000617185 RRM1P23921 792 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 SLC12A3P55017 1021 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 IGBP1P78318 339 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 PRKG1Q13976 671 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 GK3PQ14409 553 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 MESDQ14696 234 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 TCEAL1Q15170 157 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 CHSY1Q86X52 802 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 PQLC1Q8N2U9 271 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 CRYGNQ8WXF5 182 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 ALKBH8Q96BT7 664 aaKnown RBP11.98□□□□□ -0.49
TP53-222ENST00000617185 WWP1Q9H0M0 922 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 KCTD10Q9H3F6 313 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 HERC5Q9UII4 1024 aaKnown RBP11.98□□□□□ -0.49
TP53-222ENST00000617185 FBXO9Q9UK97 447 aaPredicted RBP11.98□□□□□ -0.49
TP53-222ENST00000617185 CDH7Q9ULB5 785 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 ZNRF3Q9ULT6 936 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 IVNS1ABPQ9Y6Y0 642 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 ZNF646O15015 1829 aaPredicted RBP11.98□□□□□ -0.49
TP53-222ENST00000617185 NFIBO00712 420 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 CLASP2O75122 1294 aaKnown RBP11.98□□□□□ -0.49
TP53-222ENST00000617185 S100BP04271 92 aaPredicted RBP11.98□□□□□ -0.49
TP53-222ENST00000617185 ATP5BP06576 529 aaKnown RBP11.98□□□□□ -0.49
TP53-222ENST00000617185 NR2F2P24468 414 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 RCVRNP35243 200 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 SREBF1P36956 1147 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 GJB7Q6PEY0 223 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 DLK2Q6UY11 383 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 IFNLR1Q8IU57 520 aaPredicted RBP11.98□□□□□ -0.49
TP53-222ENST00000617185 ANKMY2Q8IV38 441 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 CD101Q93033 1021 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 EIF2AK1Q9BQI3 630 aaKnown RBP11.98□□□□□ -0.49
TP53-222ENST00000617185 SYT11Q9BT88 431 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 CCDC106Q9BWC9 280 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 SEPT11Q9NVA2 429 aaKnown RBP11.98□□□□□ -0.49
TP53-222ENST00000617185 GCNT4Q9P109 453 aa11.98□□□□□ -0.49
TP53-222ENST00000617185 WRAP73Q9P2S5 460 aaPredicted RBP11.98□□□□□ -0.49
TP53-222ENST00000617185 CAP2P40123 477 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 BAG6P46379 1132 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 YWHAGP61981 247 aaKnown RBP eCLIP11.97□□□□□ -0.49
TP53-222ENST00000617185 AP3B2Q13367 1082 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 ORC2Q13416 577 aaPredicted RBP11.97□□□□□ -0.49
TP53-222ENST00000617185 IZUMO3Q5VZ72 239 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 ITIH5Q86UX2 942 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 GPR180Q86V85 440 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 LDHDQ86WU2 507 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 MCF2L2Q86YR7 1114 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 TMEM126BQ8IUX1 230 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 ZCCHC9Q8N567 271 aaKnown RBP11.97□□□□□ -0.49
TP53-222ENST00000617185 CCDC89Q8N998 374 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 SHKBP1Q8TBC3 707 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 NLRP4Q96MN2 994 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 ALG13Q9NP73 1137 aaKnown RBP11.97□□□□□ -0.49
TP53-222ENST00000617185 SAYSD1Q9NPB0 183 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 MYOZ2Q9NPC6 264 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 TAS2R14Q9NYV8 317 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 PSMD13Q9UNM6 376 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 DNM3Q9UQ16 869 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 GNEQ9Y223 722 aaKnown RBP11.97□□□□□ -0.49
TP53-222ENST00000617185 IFT52Q9Y366 437 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 TMEM150BA6NC51 233 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 CLDN3O15551 220 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 KRT75O95678 551 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 MZF1P28698 734 aaPredicted RBP11.97□□□□□ -0.49
TP53-222ENST00000617185 EPHB1P54762 984 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 LRP8Q14114 963 aa11.97□□□□□ -0.49
TP53-222ENST00000617185 SF3B4Q15427 424 aaKnown RBP eCLIP11.97□□□□□ -0.498e-8■■■■□ 21.4
TP53-222ENST00000617185 CYP2A13Q16696 494 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms