RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 DHX40Q8IX18 779 aaKnown RBP18.69■□□□□ 0.58
TRAPPC3-209ENST00000616395 DRC7Q8IY82 874 aa18.69■□□□□ 0.58
TRAPPC3-209ENST00000616395 ZNF513Q8N8E2 541 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC3-209ENST00000616395 KCNN1Q92952 543 aa18.69■□□□□ 0.58
TRAPPC3-209ENST00000616395 RNF38Q9H0F5 515 aa18.69■□□□□ 0.58
TRAPPC3-209ENST00000616395 IKZF4Q9H2S9 585 aa18.69■□□□□ 0.58
TRAPPC3-209ENST00000616395 TOR4AQ9NXH8 423 aa18.69■□□□□ 0.58
TRAPPC3-209ENST00000616395 TBC1D7Q9P0N9 293 aa18.69■□□□□ 0.58
TRAPPC3-209ENST00000616395 L1RE1Q9UN81 338 aa18.69■□□□□ 0.58
TRAPPC3-209ENST00000616395 CPQQ9Y646 472 aa18.69■□□□□ 0.58
TRAPPC3-209ENST00000616395 ANAPC1Q9H1A4 1944 aa18.69■□□□□ 0.58
TRAPPC3-209ENST00000616395 A0A1W2PQF6 199 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 TBC1D3BA6NDS4 549 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 SLC9A3R1O14745 358 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 ADH1CP00326 375 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 ATXN1LP0C7T5 689 aaKnown RBP18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 HOXB2P14652 356 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 MAOBP27338 520 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 SLC7A9P82251 487 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 CFAP221Q4G0U5 840 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 HS1BP3Q53T59 392 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 KIAA1958Q8N8K9 716 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 PIP4K2CQ8TBX8 421 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 DNAJC19Q96DA6 116 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 ERLEC1Q96DZ1 483 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 ZNF419Q96HQ0 510 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 ZNF560Q96MR9 790 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 DCBLD2Q96PD2 775 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 FGFBP2Q9BYJ0 223 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 SUSD2Q9UGT4 822 aa18.68■□□□□ 0.58
TRAPPC3-209ENST00000616395 TISP43B9A030 160 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 ATXN7O15265 892 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 HCRTO43612 131 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 ZNF217O75362 1048 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 GNSP15586 552 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 PFKLP17858 780 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 NDUFV2P19404 249 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 ABCG1P45844 678 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 PAK1Q13153 545 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 KMT5BQ4FZB7 885 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 SYCP2LQ5T4T6 812 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 TRMT11Q7Z4G4 463 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 NOC3LQ8WTT2 800 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 DHTKD1Q96HY7 919 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 PDLIM2Q96JY6 352 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 ZDHHC5Q9C0B5 715 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 IL21RQ9HBE5 538 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 CD93Q9NPY3 652 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 TRPM5Q9NZQ8 1165 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 CFAP97Q9P2B7 532 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 RWDD2AQ9UIY3 292 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 HCN2Q9UL51 889 aa18.67■□□□□ 0.58
TRAPPC3-209ENST00000616395 URB1O60287 2271 aaKnown RBP18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 ANKRD63C9JTQ0 380 aa18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 FGFR1OPO95684 399 aaKnown RBP18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 SERPINC1P01008 464 aa18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 TPM2P07951 284 aa18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 IDEP14735 1019 aa18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 USP46P62068 366 aa18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 MYL7Q01449 175 aa18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 CAMK2BQ13554 666 aa18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 LY6G5CQ5SRR4 150 aa18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 OSTM1Q86WC4 334 aa18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 MIB1Q86YT6 1006 aa18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 NAT16Q8N8M0 369 aa18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 KCNV2Q8TDN2 545 aa18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 FUBP3Q96I24 572 aaKnown RBP eCLIP18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 PRDM16Q9HAZ2 1276 aa18.66■□□□□ 0.58
TRAPPC3-209ENST00000616395 ASXL3Q9C0F0 2248 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 FAM149AA5PLN7 773 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 ZNF840PA6NDX5 716 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 GOLGA8CPA6NN73 597 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 HUS1O60921 280 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 NDUFS2O75306 463 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 DKK1O94907 266 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 CASP1P29466 404 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 CDC25BP30305 580 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 NTSR1P30989 418 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 PNPLA4P41247 253 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 MAGEA11P43364 429 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 CASP5P51878 434 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 FILIP1LQ4L180 1135 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 COBLL1Q53SF7 1204 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 C10orf76Q5T2E6 689 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 KLHL10Q6JEL2 608 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 ZNF605Q86T29 641 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 ETFBKMTQ8IXQ9 262 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 BAHD1Q8TBE0 780 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 HPS3Q969F9 1004 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 MRFAP1L1Q96HT8 127 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 RAI2Q9Y5P3 530 aa18.65■□□□□ 0.58
TRAPPC3-209ENST00000616395 ZBTB24O43167 697 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 ATP2C2O75185 946 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 OLFM2O95897 454 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 POLR2BP30876 1174 aaKnown RBP18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 KCNA1Q09470 495 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 WDR45BQ5MNZ6 344 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 SCARA3Q6AZY7 606 aa18.64■□□□□ 0.57
TRAPPC3-209ENST00000616395 STXBP4Q6ZWJ1 553 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms