RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 VN1R3Q9BXE9 311 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 TRIM5Q9C035 493 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 ZNF700Q9H0M5 742 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 FAM83DQ9H4H8 585 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 MDFICQ9P1T7 246 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 AMFRQ9UKV5 643 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 CLSPNQ9HAW4 1339 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 CFAP69A5D8W1 941 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 GOLGA6CA6NDK9 693 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 GOLGA6BA6NDN3 693 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 AQP7P3A6NL99 342 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 PYCARD-AS1I3L0S3 204 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 FOXN3O00409 490 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 GOLIM4O00461 696 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 CD3EAPO15446 510 aaKnown RBP3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 PRPF3O43395 683 aaKnown RBP3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 TIMM44O43615 452 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 TSPAN6O43657 245 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 MGEA5O60502 916 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 SRGAP2O75044 1071 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 FGAP02671 866 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 GOLGA6DP0CG33 693 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 VDRP11473 427 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 ACVR2AP27037 513 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 NR4A2P43354 598 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 RENBPP51606 427 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 SUMO3P55854 103 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 TIAL1Q01085 375 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 GBX1Q14549 363 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 CNGA2Q16280 664 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 ARHGAP29Q52LW3 1261 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 ZNF628Q5EBL2 1059 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 SYCP2LQ5T4T6 812 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 CACHD1Q5VU97 1274 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 DARS2Q6PI48 645 aaKnown RBP3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 ZNF66Q6ZN08 573 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 PTCHD4Q6ZW05 846 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 CHST15Q7LFX5 561 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 YAF2Q8IY57 180 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 PNLDC1Q8NA58 520 aaKnown RBP3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 C8orf58Q8NAV2 365 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 C1orf131Q8NDD1 294 aaKnown RBP3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 NGDNQ8NEJ9 315 aaKnown RBP3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 OR56A3Q8NH54 315 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 TMEM171Q8WVE6 324 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 PPP2R3CQ969Q6 453 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 RITA1Q96K30 269 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 MARK4Q96L34 752 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 LENG8Q96PV6 779 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 PRR25Q96S07 402 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 FAM118BQ9BPY3 351 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 C17orf80Q9BSJ5 609 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 CIPCQ9C0C6 399 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 BTBD1Q9H0C5 482 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 PRDM11Q9NQV5 511 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 SNX15Q9NRS6 342 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 GOLGA6AQ9NYA3 693 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 DNMT3BQ9UBC3 853 aaKnown RBP3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 OGDHLQ9ULD0 1010 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 NOB1Q9ULX3 412 aaKnown RBP3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 USP22Q9UPT9 525 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 LZTS1Q9Y250 596 aa3.08□□□□□ -1.92
HMGB1P24-202ENST00000615653 TMEM233B4DJY2 109 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 RRP9O43818 475 aaKnown RBP3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 TMPRSS11DO60235 418 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 PMPCBO75439 489 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 RASSF9O75901 435 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 HSP90AB1P08238 724 aaKnown RBP3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 IFIT2P09913 472 aaKnown RBP3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 NHLRC4P0CG21 123 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 MYBP10242 640 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 TXNP10599 105 aaKnown RBP3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 CD19P15391 556 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 ARHGEF7Q14155 803 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 GFOD2Q3B7J2 385 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 GRAMD1BQ3KR37 738 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 GLIPR1L2Q4G1C9 344 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 RNF220Q5VTB9 566 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 FCRL6Q6DN72 434 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 TTLL5Q6EMB2 1281 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 CCDC70Q6NSX1 233 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 SLC18B1Q6NT16 456 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 MZT2AQ6P582 158 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 CASC1Q6TDU7 716 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 SERPINA13PQ6UXR4 307 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 DPY19L3Q6ZPD9 716 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 YTHDF3Q7Z739 585 aaKnown RBP3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 MYO1HQ8N1T3 1032 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 RBMXL3Q8N7X1 1067 aaKnown RBP3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 DNAJB14Q8TBM8 379 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 ADAMTS18Q8TE60 1221 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 PIGOQ8TEQ8 1089 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 TSR2Q969E8 191 aaKnown RBP3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 APIPQ96GX9 242 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 MSLNLQ96KJ4 702 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 MACROD1Q9BQ69 325 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 RSPH9Q9H1X1 276 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 ARNT2Q9HBZ2 717 aa3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 GBA2Q9HCG7 927 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P24-202ENST00000615653 SACM1LQ9NTJ5 587 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms