RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 FAM170AA1A519 330 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 SIGLEC16A6NMB1 481 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 HHLA1C9JL84 531 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 TRIM66O15016 1216 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 LILRB3O75022 631 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 PALMO75781 387 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 GABBR2O75899 941 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 BEST1O76090 585 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 FBXO21O94952 628 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 SRGAP2BP0DMP2 458 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 AOC1P19801 751 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 CA8P35219 290 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 CACNA2D1P54289 1103 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 NAP1L1P55209 391 aaKnown RBP12□□□□□ -0.49
SLIRP-212ENST00000613856 MAP3K7CLP57077 242 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 ROR1Q01973 937 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 TPGS2Q68CL5 300 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 TMC5Q6UXY8 1006 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 SYT10Q6XYQ8 523 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 FAM183BPQ6ZVS7 135 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 ARCQ7LC44 396 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 DCLK2Q8N568 766 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 DTWD2Q8NBA8 298 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 FNIP1Q8TF40 1166 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 C8orf48Q96LL4 319 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 CEP295NLQ96MC4 621 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 CNTNAP3BQ96NU0 1288 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 SELENOOQ9BVL4 669 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 CNTNAP3Q9BZ76 1288 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 RXFP1Q9HBX9 757 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 NGRNQ9NPE2 291 aaKnown RBP12□□□□□ -0.49
SLIRP-212ENST00000613856 RRAGDQ9NQL2 400 aaPredicted RBP12□□□□□ -0.49
SLIRP-212ENST00000613856 MRPL17Q9NRX2 175 aaKnown RBP12□□□□□ -0.49
SLIRP-212ENST00000613856 ABI2Q9NYB9 513 aaPredicted RBP12□□□□□ -0.49
SLIRP-212ENST00000613856 CDY1Q9Y6F8 540 aa12□□□□□ -0.49
SLIRP-212ENST00000613856 MTCL1Q9Y4B5 1905 aaKnown RBP11.99□□□□□ -0.49
SLIRP-212ENST00000613856 DOCK8Q8NF50 2099 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 CEP250Q9BV73 2442 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 WDR27A2RRH5 827 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 TMEM191CA6NGB0 347 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 FANCGO15287 622 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 PAPSS1O43252 624 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-212ENST00000613856 SART1O43290 800 aaKnown RBP11.99□□□□□ -0.49
SLIRP-212ENST00000613856 BUB1BO60566 1050 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-212ENST00000613856 VNN2O95498 520 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 MAN1A1P33908 653 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 SLC6A3Q01959 620 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 ITIH3Q06033 890 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 ADCY1Q08828 1119 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 ADIGQ0VDE8 80 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 RAB33AQ14088 237 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 FAM102AQ5T9C2 384 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-212ENST00000613856 CES5AQ6NT32 575 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 SLC26A9Q7LBE3 791 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 ZDHHC14Q8IZN3 488 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 SIX5Q8N196 739 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 ST13P5Q8NFI4 369 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-212ENST00000613856 RSAD2Q8WXG1 361 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 NAPGQ99747 312 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-212ENST00000613856 CLSTN3Q9BQT9 956 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 RHOBTB2Q9BYZ6 727 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 LRRC4Q9HBW1 653 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 CNGB3Q9NQW8 809 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 ASNSD1Q9NWL6 643 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 AFF4Q9UHB7 1163 aaKnown RBP11.99□□□□□ -0.49
SLIRP-212ENST00000613856 DNAI1Q9UI46 699 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 ANAPC7Q9UJX3 599 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 MAFFQ9ULX9 164 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 JRKLQ9Y4A0 524 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 IRAK3Q9Y616 596 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 OTOGLQ3ZCN5 2332 aa11.99□□□□□ -0.49
SLIRP-212ENST00000613856 KMT2BQ9UMN6 2715 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-212ENST00000613856 CTAGE9A4FU28 777 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 KRBA1A5PL33 1030 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 F8VP50 259 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 GOLGA8SH3BPF8 625 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 MYO1FO00160 1098 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 TNFRSF10BO14763 440 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 ADAM12O43184 909 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 ABLIM3O94929 683 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 GLI1P08151 1106 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 HAPLN1P10915 354 aaPredicted RBP11.98□□□□□ -0.49
SLIRP-212ENST00000613856 KRT3P12035 628 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 CYP2F1P24903 491 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 CASQ1P31415 396 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 OR1D2P34982 312 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 SLC1A1P43005 524 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 TKTL1P51854 596 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 SMC1AQ14683 1233 aaKnown RBP11.98□□□□□ -0.49
SLIRP-212ENST00000613856 OR6B2Q6IFH4 312 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 DCUN1D2Q6PH85 259 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 RNF19BQ6ZMZ0 732 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 GPRIN1Q7Z2K8 1008 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 DGLUCYQ7Z3D6 616 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 DAAM2Q86T65 1068 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 SIX6OS1Q8N1H7 587 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 NIPA2Q8N8Q9 360 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 KIF18AQ8NI77 898 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 SLC22A17Q8WUG5 538 aa11.98□□□□□ -0.49
SLIRP-212ENST00000613856 IRGQQ8WZA9 623 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms