RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CORO6Q6QEF8 472 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 COPS6Q7L5N1 327 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 LCORLQ8N3X6 602 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 STN1Q9H668 368 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF701M0R085 212 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 ERP29P30040 261 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 SLC2A7Q6PXP3 512 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 TMEM126BQ8IUX1 230 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 C4orf33Q8N1A6 199 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 OR8H1Q8NGG4 311 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 HSPBAP1Q96EW2 488 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 LBHD1Q9BQE6 289 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 SUCOQ9UBS9 1254 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 SLCO1B7G3V0H7 640 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 MUSKO15146 869 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 MRPS22P82650 360 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PPARAQ07869 468 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 CHI3L2Q15782 390 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 TBC1D16Q8TBP0 767 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 NCLNQ969V3 563 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 IPO11Q9UI26 975 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PSME2Q9UL46 239 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 KIAA0391O15091 583 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 MMP1P03956 469 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 WARSP23381 471 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 NMT1P30419 496 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 STARP49675 285 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 MAPKAPK5Q8IW41 473 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 EFHBQ8N7U6 833 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 KCTD6Q8NC69 237 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 MYDGFQ969H8 173 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 FAF2Q96CS3 445 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 NUP85Q9BW27 656 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 SPRTNQ9H040 489 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 ZC3H7BQ9UGR2 993 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 USP20Q9Y2K6 914 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 A0A0A6YYK5 440 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 LRRC10BA6NIK2 292 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 BTN3A1O00481 513 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 NTRK1P04629 796 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PRCPP42785 496 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 TTI2Q6NXR4 508 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 C3orf62Q6ZUJ4 267 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 APOL6Q9BWW8 343 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 SENP2Q9HC62 589 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 IL20Q9NYY1 176 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 EVLQ9UI08 416 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 CLEC11AQ9Y240 323 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 SH3TC1Q8TE82 1336 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 MEI4A8MW99 385 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 KMOO15229 486 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 SNAP29O95721 258 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 OR52Z1P0C646 297 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PRKAR1AP10644 381 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 TGM2P21980 687 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 RBL1P28749 1068 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 MAPK12P53778 367 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 GAL3ST1Q99999 423 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PCDHGA11Q9Y5H2 935 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PPM1FP49593 454 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 ABATP80404 500 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 HSF2Q03933 536 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PLCL1Q15111 1095 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 FAM26FQ5R3K3 315 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PPM1NQ8N819 430 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 FAM118BQ9BPY3 351 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 HEPHQ9BQS7 1158 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 USP12O75317 370 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 M6PRP20645 277 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 CPA2P48052 419 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 OR2B6P58173 313 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 TOB2Q14106 344 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 SCFD2Q8WU76 684 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 AKAP1Q92667 903 aaKnown RBP eCLIP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PSKH2Q96QS6 385 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 ZFYVE28Q9HCC9 887 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 NKX1-2Q9UD57 310 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 RPL17P18621 184 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 ERFP50548 548 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 SHC4Q6S5L8 630 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PAGE2Q7Z2X7 111 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 TMEM109Q9BVC6 243 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 SYTL2Q9HCH5 934 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 STOX2Q9P2F5 926 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 SNX7Q9UNH6 387 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PSMD13Q9UNM6 376 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 PA2G4Q9UQ80 394 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 TNRQ92752 1358 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 ME2P23368 584 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 GDI2P50395 445 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 EDC3Q96F86 508 aaKnown RBP5.1□□□□□ -1.59
VPS13D-213ENST00000613099 GPR108Q9NPR9 543 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 MAFFQ9ULX9 164 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 KIF13BQ9NQT8 1826 aa5.1□□□□□ -1.59
VPS13D-213ENST00000613099 FOXN3O00409 490 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-213ENST00000613099 TXKP42681 527 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 DSTNP60981 165 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 KIF19Q2TAC6 998 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 LRRC8DQ7L1W4 858 aa5.09□□□□□ -1.59
VPS13D-213ENST00000613099 FGD2Q7Z6J4 655 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms