RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 TRDMT1O14717 391 aaKnown RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 SLC22A2O15244 555 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 ADAMTS2O95450 1211 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 PAEPP09466 180 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 ITGA7Q13683 1181 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 SPDYAQ5MJ70 313 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 MAEAQ7L5Y9 396 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 hCG_1642624A0A1W2PR95 340 aa9.02□□□□□ -0.96
TTC28-208ENST00000612946 KCNN4O15554 427 aa9.02□□□□□ -0.96
TTC28-208ENST00000612946 PRDX6P30041 224 aa9.02□□□□□ -0.96
TTC28-208ENST00000612946 ZNF568Q3ZCX4 644 aa9.02□□□□□ -0.96
TTC28-208ENST00000612946 TFDP3Q5H9I0 405 aa9.02□□□□□ -0.96
TTC28-208ENST00000612946 OR6B2Q6IFH4 312 aa9.02□□□□□ -0.96
TTC28-208ENST00000612946 MFSD5Q6N075 450 aa9.02□□□□□ -0.96
TTC28-208ENST00000612946 OR2W6PQ8NHA6 318 aa9.02□□□□□ -0.96
TTC28-208ENST00000612946 KANSL2Q9H9L4 492 aa9.02□□□□□ -0.96
TTC28-208ENST00000612946 USP17L12C9JPN9 530 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 USP17L21D6R901 530 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 ORC5O43913 435 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 HSMCR30P0CW71 290 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 AKT1P31749 480 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 EIF4A1P60842 406 aaKnown RBP9.02□□□□□ -0.97
TTC28-208ENST00000612946 ZNF57Q68EA5 555 aaPredicted RBP9.02□□□□□ -0.97
TTC28-208ENST00000612946 TMC4Q7Z404 712 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 MOSPD2Q8NHP6 518 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 PGBD4Q96DM1 585 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 TCF12Q99081 682 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 NUDT12Q9BQG2 462 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 NGRNQ9NPE2 291 aaKnown RBP9.02□□□□□ -0.97
TTC28-208ENST00000612946 SFI1A8K8P3 1242 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 PEPDP12955 493 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 DRD4P21917 467 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 HOXC9P31274 260 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 FOLH1Q04609 750 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 PDK4Q16654 411 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 ATG14Q6ZNE5 492 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 KRT77Q7Z794 578 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 TMEM126BQ8IUX1 230 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 ACMSDQ8TDX5 336 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 NUDT5Q9UKK9 219 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 CYP2D6P10635 497 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 CSE1LP55060 971 aaKnown RBP9.02□□□□□ -0.97
TTC28-208ENST00000612946 PLIN5Q00G26 463 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 TNK2Q07912 1038 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 NT5DC1Q5TFE4 455 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 MARCH7Q9H992 704 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 TMEM9Q9P0T7 183 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 DNAJB2P25686 324 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 RCVRNP35243 200 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 SERPINB5P36952 375 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 MMP13P45452 471 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 ADAM17P78536 824 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 ZCCHC9Q8N567 271 aaKnown RBP9.02□□□□□ -0.97
TTC28-208ENST00000612946 C12orf66Q96MD2 445 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 EGFL8Q99944 293 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 TBC1D10AQ9BXI6 508 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 YTHDF1Q9BYJ9 559 aaKnown RBP9.02□□□□□ -0.97
TTC28-208ENST00000612946 SLITRK2Q9H156 845 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 GPHNQ9NQX3 736 aaPredicted RBP9.02□□□□□ -0.97
TTC28-208ENST00000612946 A0A087WWV3 80 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 NEMP1O14524 444 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 LRRC41Q15345 812 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 PLET1Q6UQ28 207 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 CCDC185Q8N715 623 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 LARGE1O95461 756 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 VDRP11473 427 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 FOSL1P15407 271 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 ITIH1P19827 911 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 CHRNDQ07001 517 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 ZNF284Q2VY69 593 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 CDKAL1Q5VV42 579 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 NSMFQ6X4W1 530 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 NCCRP1Q6ZVX7 275 aaPredicted RBP9.02□□□□□ -0.97
TTC28-208ENST00000612946 NSMCE2Q96MF7 247 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 AS3MTQ9HBK9 375 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 DRG1Q9Y295 367 aaKnown RBP9.02□□□□□ -0.97
TTC28-208ENST00000612946 ERVV-2B6SEH9 535 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 H3BMM5 538 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 MAGEC1O60732 1142 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 EIF2B5Q13144 721 aaKnown RBP9.02□□□□□ -0.97
TTC28-208ENST00000612946 MXD4Q14582 209 aaPredicted RBP9.02□□□□□ -0.97
TTC28-208ENST00000612946 PLCL1Q15111 1095 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 PDK2Q15119 407 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 SLC9A4Q6AI14 798 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 NAPEPLDQ6IQ20 393 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 EYA1Q99502 592 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 C11orf70Q9BRQ4 267 aa9.02□□□□□ -0.97
TTC28-208ENST00000612946 IRX2Q9BZI1 471 aaPredicted RBP9.02□□□□□ -0.97
TTC28-208ENST00000612946 TLR2O60603 784 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ZNF806P0C7X5 589 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 MUTP22033 750 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 PHKA1P46020 1223 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 NSUN2Q08J23 767 aaKnown RBP eCLIP9.01□□□□□ -0.97
TTC28-208ENST00000612946 VPS72Q15906 364 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ZNF605Q86T29 641 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 MB21D2Q8IYB1 491 aaPredicted RBP9.01□□□□□ -0.97
TTC28-208ENST00000612946 FAM172BPA6NC97 362 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 PDPK1O15530 556 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 SDC2P34741 201 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 CDH4P55283 916 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms