RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ANO4Q32M45 955 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 N4BP2L1Q5TBK1 243 aaPredicted RBP18.77■□□□□ 0.6
SSBP1-215ENST00000612337 CLEC20AQ6ZU45 233 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 GPRIN1Q7Z2K8 1008 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 CYP2U1Q7Z449 544 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 TMEM25Q86YD3 366 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 SPACA7Q96KW9 195 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 TWNKQ96RR1 684 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 NT5C1AQ9BXI3 368 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 APOBEC3GQ9HC16 384 aaKnown RBP18.77■□□□□ 0.6
SSBP1-215ENST00000612337 PNPLA8Q9NP80 782 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 ZDHHC4Q9NPG8 344 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 CYLDQ9NQC7 956 aa18.77■□□□□ 0.6
SSBP1-215ENST00000612337 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.77■□□□□ 0.63e-8■■■■■ 34.9
SSBP1-215ENST00000612337 BCCIPQ9P287 314 aaKnown RBP eCLIP18.77■□□□□ 0.6
SSBP1-215ENST00000612337 LNP1A1A4G5 178 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 HHLA1C9JL84 531 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 KHNYNO15037 678 aaKnown RBP18.76■□□□□ 0.59
SSBP1-215ENST00000612337 GREM1O60565 184 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 KCNK5O95279 499 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 TRIM49P0CI25 452 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 TRIM49CP0CI26 452 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 PMLP29590 882 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 GCLMP48507 274 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 DHPSP49366 369 aaPredicted RBP18.76■□□□□ 0.59
SSBP1-215ENST00000612337 PPP3CAQ08209 521 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 DPYDQ12882 1025 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 NUDT18Q6ZVK8 323 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 TRMT11Q7Z4G4 463 aaKnown RBP18.76■□□□□ 0.59
SSBP1-215ENST00000612337 TERB1Q8NA31 727 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 TAS1R2Q8TE23 839 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 HMGB4Q8WW32 186 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 CYFIP2Q96F07 1278 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 CHAMP1Q96JM3 812 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 KLF16Q9BXK1 252 aaPredicted RBP18.76■□□□□ 0.59
SSBP1-215ENST00000612337 ZDHHC9Q9Y397 364 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 PCDHA5Q9Y5H7 936 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 PLXND1Q9Y4D7 1925 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 GON4LQ3T8J9 2241 aa18.76■□□□□ 0.59
SSBP1-215ENST00000612337 USP24Q9UPU5 2620 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 ZFHX4Q86UP3 3567 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 TCRBV21S2A2A0A5A6 115 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 C4orf47A7E2U8 309 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 CYP26A1O43174 497 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 CILPO75339 1184 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 KRT13P13646 458 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 ACO1P21399 889 aaKnown RBP18.75■□□□□ 0.59
SSBP1-215ENST00000612337 RPL13P26373 211 aaKnown RBP18.75■□□□□ 0.59
SSBP1-215ENST00000612337 PSMC2P35998 433 aaKnown RBP18.75■□□□□ 0.59
SSBP1-215ENST00000612337 ATP5C1P36542 298 aaKnown RBP18.75■□□□□ 0.59
SSBP1-215ENST00000612337 GOLGA8FQ08AF8 430 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 GOLGA8DPQ0D2H9 430 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 BYSLQ13895 437 aaKnown RBP18.75■□□□□ 0.59
SSBP1-215ENST00000612337 KLHDC10Q6PID8 442 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 FAM186BQ8IYM0 893 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 GUF1Q8N442 669 aaKnown RBP18.75■□□□□ 0.59
SSBP1-215ENST00000612337 ZNF513Q8N8E2 541 aaPredicted RBP18.75■□□□□ 0.59
SSBP1-215ENST00000612337 RLN3Q8WXF3 142 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 NIF3L1Q9GZT8 377 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 OSER1Q9NX31 292 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 LSM7Q9UK45 103 aaKnown RBP18.75■□□□□ 0.59
SSBP1-215ENST00000612337 ANGPTL2Q9UKU9 493 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 STARD13Q9Y3M8 1113 aa18.75■□□□□ 0.59
SSBP1-215ENST00000612337 FRYQ5TBA9 3013 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 TRIM24O15164 1050 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 MCCD1P59942 119 aaPredicted RBP18.74■□□□□ 0.59
SSBP1-215ENST00000612337 ADAM9Q13443 819 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 MAP7D1Q3KQU3 841 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 SPDYCQ5MJ68 293 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 C10orf76Q5T2E6 689 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 DAB2IPQ5VWQ8 1189 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 GRAMD4Q6IC98 578 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 KRBA2Q6ZNG9 492 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 LPCAT2Q7L5N7 544 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 CCDC150Q8NCX0 1101 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 JAKMIP2Q96AA8 810 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 XPO6Q96QU8 1125 aaKnown RBP18.74■□□□□ 0.59
SSBP1-215ENST00000612337 DNAI2Q9GZS0 605 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 NMUR1Q9HB89 426 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 TMEM8AQ9HCN3 771 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.74■□□□□ 0.59
SSBP1-215ENST00000612337 MARK1Q9P0L2 795 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 MBD1Q9UIS9 605 aaPredicted RBP18.74■□□□□ 0.59
SSBP1-215ENST00000612337 HCN2Q9UL51 889 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 CIZ1Q9ULV3 898 aaPredicted RBP18.74■□□□□ 0.59
SSBP1-215ENST00000612337 MAPK8IP1Q9UQF2 711 aa18.74■□□□□ 0.59
SSBP1-215ENST00000612337 ASPMQ8IZT6 3477 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 TNRC6BQ9UPQ9 1833 aaKnown RBP18.73■□□□□ 0.59
SSBP1-215ENST00000612337 A0A1W2PQ27 194 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 A0A1W2PQ64 194 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 A0A1W2PQD8 194 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 A0A1W2PQH9 124 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 PATE3B3GLJ2 98 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 MAP3K13O43283 966 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 CACNG3O60359 315 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 RARGP13631 454 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 CD58P19256 250 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 GTF2H1P32780 548 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 KIF11P52732 1056 aa18.73■□□□□ 0.59
SSBP1-215ENST00000612337 SHC2P98077 582 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms