RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 PTGIRP43119 386 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 MAGEA11P43364 429 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 ARSEP51690 589 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 SLC5A3P53794 718 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 CDH6P55285 790 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 ARPP19P56211 112 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 GPR17Q13304 367 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 PPIGQ13427 754 aaKnown RBP eCLIP12.84□□□□□ -0.35
CBWD1-220ENST00000612045 OTUD1Q5VV17 481 aaPredicted RBP12.84□□□□□ -0.35
CBWD1-220ENST00000612045 RNF168Q8IYW5 571 aaPredicted RBP12.84□□□□□ -0.35
CBWD1-220ENST00000612045 ATAD1Q8NBU5 361 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 ATG4AQ8WYN0 398 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 C8orf48Q96LL4 319 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 ZNF558Q96NG5 402 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 NPY6RQ99463 290 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 DCLK3Q9C098 648 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 ARFGAP3Q9NP61 516 aa12.84□□□□□ -0.35
CBWD1-220ENST00000612045 MRPL42Q9Y6G3 142 aaKnown RBP12.84□□□□□ -0.35
CBWD1-220ENST00000612045 BHMG1C9JSJ3 638 aaPredicted RBP12.83□□□□□ -0.35
CBWD1-220ENST00000612045 TRIM66O15016 1216 aa12.83□□□□□ -0.35
CBWD1-220ENST00000612045 SEC31AO94979 1220 aaKnown RBP12.83□□□□□ -0.35
CBWD1-220ENST00000612045 MYBL2P10244 700 aa12.83□□□□□ -0.35
CBWD1-220ENST00000612045 NCAM1P13591 858 aa12.83□□□□□ -0.35
CBWD1-220ENST00000612045 KCNJ1P48048 391 aa12.83□□□□□ -0.35
CBWD1-220ENST00000612045 PITX1P78337 314 aaPredicted RBP12.83□□□□□ -0.35
CBWD1-220ENST00000612045 SMARCB1Q12824 385 aa12.83□□□□□ -0.35
CBWD1-220ENST00000612045 CCNG2Q16589 344 aa12.83□□□□□ -0.35
CBWD1-220ENST00000612045 KCTD19Q17RG1 926 aaPredicted RBP12.83□□□□□ -0.35
CBWD1-220ENST00000612045 BEND6Q5SZJ8 279 aaPredicted RBP12.83□□□□□ -0.35
CBWD1-220ENST00000612045 ERMARDQ5T6L9 678 aa12.83□□□□□ -0.35
CBWD1-220ENST00000612045 PRSS55Q6UWB4 352 aaPredicted RBP12.83□□□□□ -0.35
CBWD1-220ENST00000612045 CCDC105Q8IYK2 499 aa12.83□□□□□ -0.35
CBWD1-220ENST00000612045 SLC39A11Q8N1S5 342 aa12.83□□□□□ -0.35
CBWD1-220ENST00000612045 CASKIN2Q8WXE0 1202 aa12.83□□□□□ -0.35
CBWD1-220ENST00000612045 BADQ92934 168 aa12.83□□□□□ -0.35
CBWD1-220ENST00000612045 YME1L1Q96TA2 773 aa12.83□□□□□ -0.35
CBWD1-220ENST00000612045 SNRNP25Q9BV90 132 aaKnown RBP12.83□□□□□ -0.35
CBWD1-220ENST00000612045 CALN1Q9BXU9 219 aa12.83□□□□□ -0.35
CBWD1-220ENST00000612045 ZNF446Q9NWS9 450 aa12.83□□□□□ -0.35
CBWD1-220ENST00000612045 ALPK3Q96L96 1907 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 MTMR11A4FU01 709 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 FAM187AA6NFU0 413 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 ZBBXA8MT70 800 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 M0QYT0 321 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 FGBP02675 491 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 SOD2P04179 222 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 LAG3P18627 525 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 RDXP35241 583 aaKnown RBP12.83□□□□□ -0.36
CBWD1-220ENST00000612045 CARSP49589 748 aaKnown RBP12.83□□□□□ -0.36
CBWD1-220ENST00000612045 GPR15P49685 360 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 FPGSQ05932 587 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 SNX1Q13596 522 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 DPYSL3Q14195 570 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 KRT81Q14533 505 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 PDK2Q15119 407 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 TRADDQ15628 312 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 DDR2Q16832 855 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 ZC3H12AQ5D1E8 599 aaKnown RBP12.83□□□□□ -0.36
CBWD1-220ENST00000612045 BSPRYQ5W0U4 402 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 RNF19BQ6ZMZ0 732 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 ZNF365Q70YC5 407 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 JAMLQ86YT9 394 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 MAP7D3Q8IWC1 876 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 GSPT2Q8IYD1 628 aaKnown RBP12.83□□□□□ -0.36
CBWD1-220ENST00000612045 NUP93Q8N1F7 819 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 FBXO22Q8NEZ5 403 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 SPPL2BQ8TCT7 592 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 IFT81Q8WYA0 676 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 RIN2Q8WYP3 895 aaPredicted RBP12.83□□□□□ -0.36
CBWD1-220ENST00000612045 PIK3R5Q8WYR1 880 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 TMEM169Q96HH4 297 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 TRIM51Q9BSJ1 452 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 GPATCH2LQ9NWQ4 482 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 RRN3Q9NYV6 651 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 MTRRQ9UBK8 725 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 UTP11Q9Y3A2 253 aaKnown RBP12.83□□□□□ -0.36
CBWD1-220ENST00000612045 BACE2Q9Y5Z0 518 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 CDY1Q9Y6F8 540 aa12.83□□□□□ -0.36
CBWD1-220ENST00000612045 PTPRSQ13332 1948 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 SYNJ2BP-COX16A0A087WUM0 186 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 CST8O60676 142 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 VNN2O95498 520 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 IFRD2Q12894 506 aaPredicted RBP12.82□□□□□ -0.36
CBWD1-220ENST00000612045 PSMD5Q16401 504 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 CA9Q16790 459 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 MAP9Q49MG5 647 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 SDHAF4Q5VUM1 108 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 SLC8B1Q6J4K2 584 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 KIAA1841Q6NSI8 718 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 BBS12Q6ZW61 710 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 BEND5Q7L4P6 421 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 FAM131BQ86XD5 332 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 TTC9BQ8N6N2 239 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 CCDC185Q8N715 623 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 COLGALT1Q8NBJ5 622 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 SLC7A14Q8TBB6 771 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 FAM71BQ8TC56 605 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 C2orf15Q8WU43 125 aaKnown RBP12.82□□□□□ -0.36
CBWD1-220ENST00000612045 SEC14L1Q92503 715 aa12.82□□□□□ -0.36
CBWD1-220ENST00000612045 EDEM1Q92611 657 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms