RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 ANKRD22Q5VYY1 191 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 SPRYD7Q5W111 196 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 IRGCQ6NXR0 463 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 SCYL3Q8IZE3 742 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 ABRAQ8N0Z2 381 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 GOLM1Q8NBJ4 401 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 APPL2Q8NEU8 664 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 ZNF606Q8WXB4 792 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 SLC10A4Q96EP9 437 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 CCDC77Q9BR77 488 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 NPHS2Q9NP85 383 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 NXF1Q9UBU9 619 aaKnown RBP11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 HEY1Q9Y5J3 304 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 EXTL3O43909 919 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 CSDE1O75534 798 aaKnown RBP11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 C4BPAP04003 597 aaKnown RBP11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 GJB1P08034 283 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 CD48P09326 243 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 CD19P15391 556 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 CLDN10P78369 228 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 NCOA4Q13772 614 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 TFDP1Q14186 410 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 CCNG2Q16589 344 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 UNC5DQ6UXZ4 953 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 CROCCP2Q86T23 111 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 VPS50Q96JG6 964 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 WRNIP1Q96S55 665 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 B3GNT4Q9C0J1 378 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 ADAMTS5Q9UNA0 930 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 AGTPBP1Q9UPW5 1226 aa11.13□□□□□ -0.63
PCDHGC3-202ENST00000611950 DOCK1Q14185 1865 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 PHIPQ8WWQ0 1821 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 LIASO43766 372 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 ZC3H11AO75152 810 aaKnown RBP eCLIP11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 CYP1A1P04798 512 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 GSTA1P08263 222 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 SRGAP2CP0DJJ0 459 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 RBP3P10745 1247 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 KRT4P19013 534 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 CD53P19397 219 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 KLRC2P26717 231 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 ETV3P41162 512 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 TSPAN7P41732 249 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 TFAMQ00059 246 aaKnown RBP11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 IL9RQ01113 521 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 CNTN2Q02246 1040 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 PSMD6Q15008 389 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 TAF5Q15542 800 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 MSS51Q4VC12 460 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 DNAJC24Q6P3W2 148 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 ENOSF1Q7L5Y1 443 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 FEZF2Q8TBJ5 459 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 CCDC110Q8TBZ0 833 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 CLMNQ96JQ2 1002 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 RXFP1Q9HBX9 757 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 AVENQ9NQS1 362 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 NFASCO94856 1347 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 LOC105371267A0A1B0GV96 52 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 TCRBV7S3A2A0A539 114 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 SPATA31C2B4DYI2 1134 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 ALDH1A1P00352 501 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 ADRA1DP25100 572 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 MYL6P60660 151 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 SGSM1Q2NKQ1 1148 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 WDR72Q3MJ13 1102 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 BBS9Q3SYG4 887 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 GPAT2Q6NUI2 795 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 RHPN2Q8IUC4 686 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 CCDC33Q8N5R6 958 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 C7orf57Q8NEG2 295 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 SLCO2A1Q92959 643 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 UTP4Q969X6 686 aaKnown RBP11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 MAGEB18Q96M61 343 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 SLITRK1Q96PX8 696 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 UQCC2Q9BRT2 126 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 ABCG4Q9H172 646 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 TPK1Q9H3S4 243 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 NKX1-2Q9UD57 310 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 ZMYND8Q9ULU4 1186 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 CHKBQ9Y259 395 aa11.12□□□□□ -0.63
PCDHGC3-202ENST00000611950 KRT19P08727 400 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 SUPT20HL2P0C7V6 817 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 GLRA2P23416 452 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 EPHB2P29323 1055 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 SLC1A1P43005 524 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 MTFR1Q15390 333 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 SUPT20HL1Q3ZLR7 823 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 GALNTL6Q49A17 601 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 GRAMD4Q6IC98 578 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 DUS1LQ6P1R4 473 aaKnown RBP11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 LVRNQ6Q4G3 990 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 RFX8Q6ZV50 586 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 TRABD2AQ86V40 505 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 THNSL1Q8IYQ7 743 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 ANKRD35Q8N283 1001 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 LRRC71Q8N4P6 559 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 CCHCR1Q8TD31 782 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 MAML1Q92585 1016 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 SMC6Q96SB8 1091 aa11.11□□□□□ -0.63
PCDHGC3-202ENST00000611950 DNAI2Q9GZS0 605 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms