RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 C1orf228Q6PIY5 440 aa27.33■■□□□ 1.97
VEGFA-226ENST00000611736 TADA2BQ86TJ2 420 aa27.33■■□□□ 1.97
VEGFA-226ENST00000611736 WBP2Q969T9 261 aa27.33■■□□□ 1.97
VEGFA-226ENST00000611736 BPIFA3Q9BQP9 254 aa27.33■■□□□ 1.97
VEGFA-226ENST00000611736 FUCA2Q9BTY2 467 aa27.33■■□□□ 1.97
VEGFA-226ENST00000611736 CLIC5Q9NZA1 410 aa27.33■■□□□ 1.97
VEGFA-226ENST00000611736 DNMT3LQ9UJW3 386 aa27.33■■□□□ 1.97
VEGFA-226ENST00000611736 NCAM2O15394 837 aa27.32■■□□□ 1.96
VEGFA-226ENST00000611736 KLK7P49862 253 aa27.32■■□□□ 1.96
VEGFA-226ENST00000611736 DRAP1Q14919 205 aaPredicted RBP27.32■■□□□ 1.96
VEGFA-226ENST00000611736 PON2Q15165 354 aa27.32■■□□□ 1.96
VEGFA-226ENST00000611736 BHLHA9Q7RTU4 235 aa27.32■■□□□ 1.96
VEGFA-226ENST00000611736 DHX40Q8IX18 779 aaKnown RBP27.32■■□□□ 1.96
VEGFA-226ENST00000611736 ZNF687Q8N1G0 1237 aa27.32■■□□□ 1.96
VEGFA-226ENST00000611736 KLF16Q9BXK1 252 aaPredicted RBP27.32■■□□□ 1.96
VEGFA-226ENST00000611736 MYOFQ9NZM1 2061 aa27.32■■□□□ 1.96
VEGFA-226ENST00000611736 E2F8A0AVK6 867 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 SLC9A3R1O14745 358 aaPredicted RBP27.31■■□□□ 1.96
VEGFA-226ENST00000611736 GABBR2O75899 941 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 NFATC1O95644 943 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 ATP1A3P13637 1013 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 UCHL3P15374 230 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 GPD2P43304 727 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 ZNF165P49910 485 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 TCF15Q12870 199 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 FZD5Q13467 585 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 KLHDC10Q6PID8 442 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 RSRC2Q7L4I2 434 aaKnown RBP27.31■■□□□ 1.96
VEGFA-226ENST00000611736 MIB1Q86YT6 1006 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 CLDN23Q96B33 292 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 HSFY1Q96LI6 401 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 CDK5RAP1Q96SZ6 601 aaKnown RBP27.31■■□□□ 1.96
VEGFA-226ENST00000611736 CNGB3Q9NQW8 809 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 RASAL2Q9UJF2 1139 aa27.31■■□□□ 1.96
VEGFA-226ENST00000611736 SMTNL1A8MU46 457 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 LGALS16A8MUM7 142 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 GJA4P35212 333 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 PTPN5P54829 565 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 PTK2Q05397 1052 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 GOLGA8FQ08AF8 430 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 GOLGA8DPQ0D2H9 430 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 EFEMP1Q12805 493 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 BTBD8Q5XKL5 378 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 FAM71AQ8IYT1 594 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 KIAA1958Q8N8K9 716 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 CHFRQ96EP1 664 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 NAA15Q9BXJ9 866 aaKnown RBP27.3■■□□□ 1.96
VEGFA-226ENST00000611736 LMAN1LQ9HAT1 526 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 PLCB1Q9NQ66 1216 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 ST7Q9NRC1 585 aa27.3■■□□□ 1.96
VEGFA-226ENST00000611736 YJEFN3A6XGL0 299 aa27.29■■□□□ 1.96
VEGFA-226ENST00000611736 E7ENQ6 273 aa27.29■■□□□ 1.96
VEGFA-226ENST00000611736 CLCN1P35523 988 aa27.29■■□□□ 1.96
VEGFA-226ENST00000611736 DAOAP59103 153 aa27.29■■□□□ 1.96
VEGFA-226ENST00000611736 NHLH1Q02575 133 aa27.29■■□□□ 1.96
VEGFA-226ENST00000611736 NR1H3Q13133 447 aa27.29■■□□□ 1.96
VEGFA-226ENST00000611736 NAIF1Q69YI7 327 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-226ENST00000611736 SLC47A2Q86VL8 602 aa27.29■■□□□ 1.96
VEGFA-226ENST00000611736 ZNF276Q8N554 614 aa27.29■■□□□ 1.96
VEGFA-226ENST00000611736 MIS12Q9H081 205 aa27.29■■□□□ 1.96
VEGFA-226ENST00000611736 GANQ9H2C0 597 aa27.29■■□□□ 1.96
VEGFA-226ENST00000611736 FAM207AQ9NSI2 230 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-226ENST00000611736 TBC1D14Q9P2M4 693 aa27.29■■□□□ 1.96
VEGFA-226ENST00000611736 H0Y858 1186 aa27.28■■□□□ 1.96
VEGFA-226ENST00000611736 CYP17A1P05093 508 aa27.28■■□□□ 1.96
VEGFA-226ENST00000611736 AMPD2Q01433 879 aa27.28■■□□□ 1.96
VEGFA-226ENST00000611736 UBXN1Q04323 297 aa27.28■■□□□ 1.96
VEGFA-226ENST00000611736 SYCP1Q15431 976 aa27.28■■□□□ 1.96
VEGFA-226ENST00000611736 MEA1Q16626 185 aa27.28■■□□□ 1.96
VEGFA-226ENST00000611736 BSPRYQ5W0U4 402 aa27.28■■□□□ 1.96
VEGFA-226ENST00000611736 APTXQ7Z2E3 356 aaKnown RBP27.28■■□□□ 1.96
VEGFA-226ENST00000611736 PASD1Q8IV76 773 aa27.28■■□□□ 1.96
VEGFA-226ENST00000611736 BBS7Q8IWZ6 715 aa27.28■■□□□ 1.96
VEGFA-226ENST00000611736 CLEC4CQ8WTT0 213 aa27.28■■□□□ 1.96
VEGFA-226ENST00000611736 EDEM1Q92611 657 aa27.28■■□□□ 1.96
VEGFA-226ENST00000611736 PCMTD1Q96MG8 357 aaPredicted RBP27.28■■□□□ 1.96
VEGFA-226ENST00000611736 RBM12Q9NTZ6 932 aaKnown RBP27.28■■□□□ 1.96
VEGFA-226ENST00000611736 SPATA6Q9NWH7 488 aaPredicted RBP27.28■■□□□ 1.96
VEGFA-226ENST00000611736 CYTH4Q9UIA0 394 aa27.28■■□□□ 1.96
VEGFA-226ENST00000611736 LRRC10BA6NIK2 292 aa27.27■■□□□ 1.96
VEGFA-226ENST00000611736 CHRNB1P11230 501 aa27.27■■□□□ 1.96
VEGFA-226ENST00000611736 MAGEA9P43362 315 aa27.27■■□□□ 1.96
VEGFA-226ENST00000611736 RPS9P46781 194 aaKnown RBP27.27■■□□□ 1.96
VEGFA-226ENST00000611736 DHCR24Q15392 516 aa27.27■■□□□ 1.96
VEGFA-226ENST00000611736 SMYD5Q6GMV2 418 aa27.27■■□□□ 1.96
VEGFA-226ENST00000611736 ADGRG2Q8IZP9 1017 aa27.27■■□□□ 1.96
VEGFA-226ENST00000611736 SCML4Q8N228 414 aa27.27■■□□□ 1.96
VEGFA-226ENST00000611736 STK33Q9BYT3 514 aa27.27■■□□□ 1.96
VEGFA-226ENST00000611736 MARCH2Q9P0N8 246 aa27.27■■□□□ 1.96
VEGFA-226ENST00000611736 LSM7Q9UK45 103 aaKnown RBP27.27■■□□□ 1.96
VEGFA-226ENST00000611736 SIK3Q9Y2K2 1263 aa27.27■■□□□ 1.96
VEGFA-226ENST00000611736 ATG2BQ96BY7 2078 aa27.27■■□□□ 1.96
VEGFA-226ENST00000611736 FBXO21O94952 628 aa27.26■■□□□ 1.95
VEGFA-226ENST00000611736 HMBSP08397 361 aa27.26■■□□□ 1.95
VEGFA-226ENST00000611736 POLR2FP61218 127 aaKnown RBP27.26■■□□□ 1.95
VEGFA-226ENST00000611736 LRRC32Q14392 662 aa27.26■■□□□ 1.95
VEGFA-226ENST00000611736 ANGPT1Q15389 498 aa27.26■■□□□ 1.95
VEGFA-226ENST00000611736 SKOR2Q2VWA4 1001 aaPredicted RBP27.26■■□□□ 1.95
VEGFA-226ENST00000611736 ZSCAN23Q3MJ62 389 aa27.26■■□□□ 1.95
VEGFA-226ENST00000611736 C1orf210Q8IVY1 113 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms