RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 MATKP42679 507 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 ZNF143P52747 638 aaPredicted RBP16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 YWHAGP61981 247 aaKnown RBP eCLIP16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 HYAL1Q12794 435 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 ACAP1Q15027 740 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 TCEAL5Q5H9L2 206 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 TRNP1Q6NT89 227 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 HFE2Q6ZVN8 426 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 SLFN11Q7Z7L1 901 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 ELMOD1Q8N336 334 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 NIPA2Q8N8Q9 360 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 STKLD1Q8NE28 680 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 PDZD8Q8NEN9 1154 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 CMASQ8NFW8 434 aaPredicted RBP16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 UBE2Q2Q8WVN8 375 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 RXFP2Q8WXD0 754 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 CASP10Q92851 521 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 NT5C3BQ969T7 300 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 MCEEQ96PE7 176 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 SLITRK1Q96PX8 696 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 PRKD2Q9BZL6 878 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 TRIM7Q9C029 511 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 TLR8Q9NR97 1041 aaKnown RBP16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 ABCC13Q9NSE7 274 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 RRN3Q9NYV6 651 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.72■□□□□ 0.277e-7■■■■■ 41.8
CLTCL1-207ENST00000611723 CLIC5Q9NZA1 410 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 IP6K2Q9UHH9 426 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 ANAPC7Q9UJX3 599 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 MTCH2Q9Y6C9 303 aa16.72■□□□□ 0.27
CLTCL1-207ENST00000611723 A0A1W2PQH9 124 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 KIF5CO60282 957 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 GRAP2O75791 330 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 MOCS3O95396 460 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 F11P03951 625 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 PDGFRAP16234 1089 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 GPD1P21695 349 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 NOS2P35228 1153 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 FLT3P36888 993 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 EPHA5P54756 1037 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 NAP1L1P55209 391 aaKnown RBP16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 RNASE9P60153 205 aaKnown RBP16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 OGDHQ02218 1023 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 IFRD2Q12894 506 aaPredicted RBP16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 PIGHQ14442 188 aaPredicted RBP16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 TAF12Q16514 161 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 DEFB106AQ8N104 65 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 LRRC57Q8N9N7 239 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 VN1R2Q8NFZ6 395 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 GOLGA1Q92805 767 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 FAM149B1Q96BN6 582 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 CNPY3Q9BT09 278 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 IRX2Q9BZI1 471 aaPredicted RBP16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 EPHX3Q9H6B9 360 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 NMUR1Q9HB89 426 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 DZANK1Q9NVP4 752 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 GMIPQ9P107 970 aa16.71■□□□□ 0.27
CLTCL1-207ENST00000611723 GRID2IPA4D2P6 1211 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 ZNF840PA6NDX5 716 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 ESPNB1AK53 854 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 NCK2O43639 380 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 BUB1BO60566 1050 aaPredicted RBP16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 XYLBO75191 536 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 RFPL2O75678 378 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 PROSCO94903 275 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 PTPN2P17706 415 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 HOXD11P31277 338 aaPredicted RBP16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 MAN1A1P33908 653 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 SLC1A1P43005 524 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 PTPN9P43378 593 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 PGFP49763 221 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 ADAM15Q13444 863 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 CCDC14Q49A88 953 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 PABPC1LQ4VXU2 614 aaKnown RBP16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 BTBD8Q5XKL5 378 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 C11orf63Q6NUN7 778 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 NYAP1Q6ZVC0 841 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 BNIPLQ7Z465 357 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 TMC8Q8IU68 726 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 SYCE1Q8N0S2 351 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 EMC1Q8N766 993 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 TRIM58Q8NG06 486 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 CENPIQ92674 756 aaPredicted RBP16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 BTBD6Q96KE9 485 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 NPY6RQ99463 290 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 IL21Q9HBE4 155 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 ZNF334Q9HCZ1 680 aaPredicted RBP16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 TMEM51Q9NW97 253 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 OSER1Q9NX31 292 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 MAGED2Q9UNF1 606 aaPredicted RBP16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 NAALADL1Q9UQQ1 740 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 CAPN6Q9Y6Q1 641 aa16.7■□□□□ 0.26
CLTCL1-207ENST00000611723 TRANK1O15050 2925 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 CCL16O15467 120 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 ZNF500O60304 480 aaPredicted RBP16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 PALMO75781 387 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 ENDOD1O94919 500 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 FGF19O95750 216 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 TUBB4AP04350 444 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 RALAP11233 206 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms