RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 ARHGAP33O14559 1287 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 AP5Z1O43299 807 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 SH3BP5O60239 455 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 OPHN1O60890 802 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 TACC1O75410 805 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 BMP15O95972 392 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 ZDHHC11BP0C7U3 371 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 IDEP14735 1019 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 PTPN1P18031 435 aaKnown RBP12.51□□□□□ -0.41
FDPS-220ENST00000611010 PPP3CCP48454 512 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 SCAPQ12770 1279 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 MAPRE1Q15691 268 aaKnown RBP12.51□□□□□ -0.41
FDPS-220ENST00000611010 SOWAHCQ53LP3 525 aaPredicted RBP12.51□□□□□ -0.41
FDPS-220ENST00000611010 C19orf48Q6RUI8 117 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 TOGARAM2Q6ZUX3 1019 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 HS2ST1Q7LGA3 356 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 FAM35AQ86V20 835 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 WDR49Q8IV35 697 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 SYCP3Q8IZU3 236 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 PNPLA1Q8N8W4 532 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 LINC00301Q8NCQ3 95 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 B3GALNT2Q8NCR0 500 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 ZMIZ2Q8NF64 920 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 BBC3Q96PG8 261 aaPredicted RBP12.51□□□□□ -0.41
FDPS-220ENST00000611010 MMS19Q96T76 1030 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 DUSP9Q99956 384 aaKnown RBP12.51□□□□□ -0.41
FDPS-220ENST00000611010 ELOVL4Q9GZR5 314 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 SPHK2Q9NRA0 654 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 IL37Q9NZH6 218 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 HSPBP1Q9NZL4 362 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 GMIPQ9P107 970 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 RAD54BQ9Y620 910 aa12.51□□□□□ -0.41
FDPS-220ENST00000611010 SETXQ7Z333 2677 aaKnown RBP12.5□□□□□ -0.41
FDPS-220ENST00000611010 FAM92AA1XBS5 289 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.5□□□□□ -0.41
FDPS-220ENST00000611010 PRRT4C9JH25 899 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 TGFB1I1O43294 461 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 CBFA2T3O75081 653 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 TNNC2P02585 160 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 FTH1P19P0C7X4 201 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 IRF1P10914 325 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 SLC5A3P53794 718 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 GAD2Q05329 585 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 GFPT1Q06210 699 aaPredicted RBP12.5□□□□□ -0.41
FDPS-220ENST00000611010 ALCAMQ13740 583 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 DUOXA2Q1HG44 320 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 SNX30Q5VWJ9 437 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 TDRD10Q5VZ19 366 aaKnown RBP12.5□□□□□ -0.41
FDPS-220ENST00000611010 SV2BQ7L1I2 683 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 DDX42Q86XP3 938 aaKnown RBP eCLIP12.5□□□□□ -0.416e-7■■□□□ 13
FDPS-220ENST00000611010 HDDC3Q8N4P3 179 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 TRIML1Q8N9V2 468 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 PLEKHO2Q8TD55 490 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 IPO4Q8TEX9 1081 aaKnown RBP12.5□□□□□ -0.41
FDPS-220ENST00000611010 ADAMTS14Q8WXS8 1223 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 ZNF516Q92618 1163 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 FBXO32Q969P5 355 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 SLITRK1Q96PX8 696 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 GABRG3Q99928 467 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 SDCBP2Q9H190 292 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 SMYD3Q9H7B4 428 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 PANK4Q9NVE7 773 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 TBC1D14Q9P2M4 693 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 CHORDC1Q9UHD1 332 aaPredicted RBP12.5□□□□□ -0.41
FDPS-220ENST00000611010 PCDHA7Q9UN72 937 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 STARD13Q9Y3M8 1113 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 PCDHB13Q9Y5F0 798 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 SRPRBQ9Y5M8 271 aaKnown RBP12.5□□□□□ -0.41
FDPS-220ENST00000611010 PLXNA2O75051 1894 aa12.5□□□□□ -0.41
FDPS-220ENST00000611010 NYNRINQ9P2P1 1898 aaKnown RBP12.5□□□□□ -0.41
FDPS-220ENST00000611010 TBC1D3BA6NDS4 549 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 H0Y626 953 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 CACNG3O60359 315 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 BEST1O76090 585 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 TRIM16O95361 564 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 YWHAQP27348 245 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 NTSR1P30989 418 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 GNL1P36915 607 aaPredicted RBP12.49□□□□□ -0.41
FDPS-220ENST00000611010 DPP6P42658 865 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 BNC1Q01954 994 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 GRIK2Q13002 908 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 SLC39A14Q15043 492 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 ZNF423Q2M1K9 1284 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 COL28A1Q2UY09 1125 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 RRAGBQ5VZM2 374 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 EPM2AIP1Q7L775 607 aaPredicted RBP12.49□□□□□ -0.41
FDPS-220ENST00000611010 NAXDQ8IW45 347 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 NUP93Q8N1F7 819 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 OR6B3Q8NGW1 331 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 CEP76Q8TAP6 659 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 MDM1Q8TC05 714 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 OVCA2Q8WZ82 227 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 OTUB2Q96DC9 234 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 CGRRF1Q99675 332 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 OSER1Q9NX31 292 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 TOR4AQ9NXH8 423 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 DEC1Q9P2X7 70 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 HMGXB4Q9UGU5 601 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 SLCO1B1Q9Y6L6 691 aa12.49□□□□□ -0.41
FDPS-220ENST00000611010 ZNF233A6NK53 670 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms