RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 HPCAL4Q9UM19 191 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 HHLA1C9JL84 531 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 C2CD2LO14523 706 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 POLR3GO15318 223 aaPredicted RBP12.85□□□□□ -0.35
TP53-219ENST00000610538 HSF2BPO75031 334 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 ZBED1O96006 694 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 COL6A1P12109 1028 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 PECAM1P16284 738 aaPredicted RBP12.85□□□□□ -0.35
TP53-219ENST00000610538 FNTAP49354 379 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 OTUD4Q01804 1114 aaKnown RBP12.85□□□□□ -0.35
TP53-219ENST00000610538 CUL1Q13616 776 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 EMBQ6PCB8 327 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 C1orf228Q6PIY5 440 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 ZC3H18Q86VM9 953 aaKnown RBP12.85□□□□□ -0.35
TP53-219ENST00000610538 NPAS4Q8IUM7 802 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 CRIPAKQ8N1N5 446 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 SLC7A14Q8TBB6 771 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 KCTD13Q8WZ19 329 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 PKMYT1Q99640 499 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 DDX23Q9BUQ8 820 aaKnown RBP12.85□□□□□ -0.35
TP53-219ENST00000610538 ELAC1Q9H777 363 aaKnown RBP12.85□□□□□ -0.35
TP53-219ENST00000610538 DNAJC17Q9NVM6 304 aaKnown RBP12.85□□□□□ -0.35
TP53-219ENST00000610538 TBX21Q9UL17 535 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 PCDHB8Q9UN66 801 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 HEY1Q9Y5J3 304 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 UNC80Q8N2C7 3258 aa12.85□□□□□ -0.35
TP53-219ENST00000610538 FAM187AA6NFU0 413 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 TRAPPC3O43617 180 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 LIASO43766 372 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 GALTP07902 379 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 IL4RP24394 825 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 ADCY8P40145 1251 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 GJA8P48165 433 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 IKBKEQ14164 716 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 DPYSL3Q14195 570 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 CTXN3Q4LDR2 81 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 RSPO2Q6UXX9 243 aaPredicted RBP12.84□□□□□ -0.35
TP53-219ENST00000610538 C12orf50Q8NA57 414 aaPredicted RBP12.84□□□□□ -0.35
TP53-219ENST00000610538 BCL7CQ8WUZ0 217 aaPredicted RBP12.84□□□□□ -0.35
TP53-219ENST00000610538 MAIP1Q8WWC4 291 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 APBB2Q92870 758 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 PWWP2AQ96N64 755 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 TOX2Q96NM4 488 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 SEZ6LQ9BYH1 1024 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 POPDC2Q9HBU9 364 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 PLSCR2Q9NRY7 297 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 SLC27A5Q9Y2P5 690 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 TRIM43BA6NCK2 446 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 H3BQF6 201 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 CXCL10P02778 98 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 CLTBP09497 229 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 HSPA8P11142 646 aaKnown RBP12.84□□□□□ -0.35
TP53-219ENST00000610538 TNFRSF8P28908 595 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 GGCXP38435 758 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 GYS2P54840 703 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 DAOAP59103 153 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 COPS2P61201 443 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 SLC25A52Q3SY17 297 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 BOLA3Q53S33 107 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 CCDC25Q86WR0 208 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 TRIM43Q96BQ3 446 aaPredicted RBP12.84□□□□□ -0.35
TP53-219ENST00000610538 DMAP1Q9NPF5 467 aaPredicted RBP12.84□□□□□ -0.35
TP53-219ENST00000610538 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.84□□□□□ -0.35
TP53-219ENST00000610538 MARCH5Q9NX47 278 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 GRHL1Q9NZI5 618 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 ATP8A1Q9Y2Q0 1164 aa12.84□□□□□ -0.35
TP53-219ENST00000610538 MRPL42Q9Y6G3 142 aaKnown RBP12.84□□□□□ -0.35
TP53-219ENST00000610538 DPYSL4O14531 572 aa12.83□□□□□ -0.35
TP53-219ENST00000610538 RPL17P18621 184 aaKnown RBP12.83□□□□□ -0.35
TP53-219ENST00000610538 ALDH7A1P49419 539 aaKnown RBP12.83□□□□□ -0.35
TP53-219ENST00000610538 DHX9Q08211 1270 aaKnown RBP12.83□□□□□ -0.35
TP53-219ENST00000610538 RTP2Q5QGT7 225 aa12.83□□□□□ -0.35
TP53-219ENST00000610538 SPOUT1Q5T280 376 aaKnown RBP12.83□□□□□ -0.35
TP53-219ENST00000610538 ERMARDQ5T6L9 678 aa12.83□□□□□ -0.35
TP53-219ENST00000610538 PRSS55Q6UWB4 352 aaPredicted RBP12.83□□□□□ -0.35
TP53-219ENST00000610538 ZNF365Q70YC5 407 aa12.83□□□□□ -0.35
TP53-219ENST00000610538 SEC14L1Q92503 715 aa12.83□□□□□ -0.35
TP53-219ENST00000610538 FMO2Q99518 471 aa12.83□□□□□ -0.35
TP53-219ENST00000610538 C11orf84Q9BUA3 381 aaPredicted RBP12.83□□□□□ -0.35
TP53-219ENST00000610538 CSNK1G1Q9HCP0 422 aa12.83□□□□□ -0.35
TP53-219ENST00000610538 CYLDQ9NQC7 956 aa12.83□□□□□ -0.35
TP53-219ENST00000610538 FAM114A2Q9NRY5 505 aa12.83□□□□□ -0.35
TP53-219ENST00000610538 PIGVQ9NUD9 493 aa12.83□□□□□ -0.35
TP53-219ENST00000610538 SGK1O00141 431 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 OAZ2O95190 189 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 GAS8O95995 478 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 AMHP03971 560 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 DESP17661 470 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 TYMPP19971 482 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 DEFB103AP81534 67 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 ZDHHC24Q6UX98 284 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 OTOP2Q7RTS6 562 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 OR2W6PQ8NHA6 318 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 SPATA18Q8TC71 538 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.83□□□□□ -0.36
TP53-219ENST00000610538 RUBCNQ92622 972 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 C11orf49Q9H6J7 331 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 PCDH18Q9HCL0 1135 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 ZDHHC18Q9NUE0 388 aa12.83□□□□□ -0.36
TP53-219ENST00000610538 AP4E1Q9UPM8 1137 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms