RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 UPK3BL2E5RIL1 263 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 H0Y626 953 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 SCAMP3O14828 347 aaKnown RBP14.41□□□□□ -0.1
CTSA-218ENST00000607814 TRIM66O15016 1216 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 SLC16A3O15427 465 aaKnown RBP14.41□□□□□ -0.1
CTSA-218ENST00000607814 AP1G2O75843 785 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 TRIM16O95361 564 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 TOP3BO95985 862 aaKnown RBP14.41□□□□□ -0.1
CTSA-218ENST00000607814 ARSAP15289 507 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 GTF2H1P32780 548 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 DPP6P42658 865 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 MAP3K7CLP57077 242 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 TAF10Q12962 218 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 FBXL13Q8NEE6 735 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 ZMIZ2Q8NF64 920 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 OSCP1Q8WVF1 389 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 SLC35C1Q96A29 364 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 TRMT2BQ96GJ1 504 aaKnown RBP14.41□□□□□ -0.1
CTSA-218ENST00000607814 SPATA17Q96L03 361 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 CNOT6LQ96LI5 555 aaKnown RBP14.41□□□□□ -0.1
CTSA-218ENST00000607814 C8orf48Q96LL4 319 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 MYRFLQ96LU7 910 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 MED15Q96RN5 788 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 SMOQ99835 787 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 SRRTQ9BXP5 876 aaKnown RBP14.41□□□□□ -0.1
CTSA-218ENST00000607814 KRT82Q9NSB4 513 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 POLR3BQ9NW08 1133 aaPredicted RBP14.41□□□□□ -0.1
CTSA-218ENST00000607814 THADAQ6YHU6 1953 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 HELZ2Q9BYK8 2649 aaKnown RBP14.41□□□□□ -0.1
CTSA-218ENST00000607814 PTPRDP23468 1912 aa14.41□□□□□ -0.1
CTSA-218ENST00000607814 FAM221BA6H8Z2 402 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 TAF4O00268 1085 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 RDXP35241 583 aaKnown RBP14.4□□□□□ -0.1
CTSA-218ENST00000607814 PGFP49763 221 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 MCCD1P59942 119 aaPredicted RBP14.4□□□□□ -0.1
CTSA-218ENST00000607814 IRX4P78413 519 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 ZXDBP98169 803 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 NR1H3Q13133 447 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 PAK1Q13153 545 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 MTF1Q14872 753 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 SPDYCQ5MJ68 293 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 FILIP1Q7Z7B0 1213 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 CRYBG2Q8N1P7 616 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 CCDC150Q8NCX0 1101 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 DEFB124Q8NES8 71 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 EZH1Q92800 747 aaPredicted RBP14.4□□□□□ -0.1
CTSA-218ENST00000607814 TNIP3Q96KP6 325 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 RNF38Q9H0F5 515 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 LMBRD1Q9NUN5 540 aa14.4□□□□□ -0.1
CTSA-218ENST00000607814 DUS2Q9NX74 493 aaKnown RBP14.4□□□□□ -0.1
CTSA-218ENST00000607814 UXTQ9UBK9 157 aaPredicted RBP14.4□□□□□ -0.1
CTSA-218ENST00000607814 GON4LQ3T8J9 2241 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 KIAA1549LQ6ZVL6 1849 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 TNFRSF10BO14763 440 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 STX10O60499 249 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 CILPO75339 1184 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 CALCAP01258 141 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 CKMP06732 381 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 HDCP19113 662 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 FMO5P49326 533 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 ENPEPQ07075 957 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 UAP1L1Q3KQV9 507 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 GPRIN1Q7Z2K8 1008 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 UNC93AQ86WB7 457 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 NUP93Q8N1F7 819 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 KAT5Q92993 513 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 CYFIP2Q96F07 1278 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 HEXIM2Q96MH2 286 aaKnown RBP14.39□□□□□ -0.11
CTSA-218ENST00000607814 CEP63Q96MT8 703 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 NT5C1AQ9BXI3 368 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 NUSAP1Q9BXS6 441 aaKnown RBP14.39□□□□□ -0.11
CTSA-218ENST00000607814 CLSTN2Q9H4D0 955 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 CYP3A43Q9HB55 503 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 CISHQ9NSE2 258 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 SMPD4Q9NXE4 827 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 TRPM5Q9NZQ8 1165 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 GCNT4Q9P109 453 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 OBSL1O75147 1896 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 PI4KAP42356 2102 aa14.39□□□□□ -0.11
CTSA-218ENST00000607814 MYO16Q9Y6X6 1858 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 TRAV19A0A0A6YYK7 116 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 ZNF840PA6NDX5 716 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 PATE3B3GLJ2 98 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 HYAL3O43820 417 aaPredicted RBP14.38□□□□□ -0.11
CTSA-218ENST00000607814 YWHAQP27348 245 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 HOXD12P35452 270 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 DHPSP49366 369 aaPredicted RBP14.38□□□□□ -0.11
CTSA-218ENST00000607814 SLC5A3P53794 718 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 INCA1Q0VD86 236 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 TRIM61Q5EBN2 209 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 PPP1R26Q5T8A7 1209 aaPredicted RBP14.38□□□□□ -0.11
CTSA-218ENST00000607814 NAIF1Q69YI7 327 aaPredicted RBP14.38□□□□□ -0.11
CTSA-218ENST00000607814 LPCAT2Q7L5N7 544 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 PIP4P1Q86T03 277 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 SYT12Q8IV01 421 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 OLIG1Q8TAK6 271 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 USP33Q8TEY7 942 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 PIGKQ92643 395 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 FBXO32Q969P5 355 aa14.38□□□□□ -0.11
CTSA-218ENST00000607814 SMARCD1Q96GM5 515 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms