RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 TULP3O75386 442 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 ALDH1A2O94788 518 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 ADRB1P08588 477 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 IRF1P10914 325 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 CD58P19256 250 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 TRIM21P19474 475 aaKnown RBP8.04□□□□□ -1.12
CUX1-219ENST00000606749 ACO1P21399 889 aaKnown RBP8.04□□□□□ -1.12
CUX1-219ENST00000606749 BCKDHBP21953 392 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 GBP1P32455 592 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 PLA2G4AP47712 749 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 KIF11P52732 1056 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 CREB5Q02930 508 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 KDSRQ06136 332 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 ANO4Q32M45 955 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 EDRF1Q3B7T1 1238 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 PREPLQ4J6C6 727 aaPredicted RBP8.04□□□□□ -1.12
CUX1-219ENST00000606749 EOGTQ5NDL2 527 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 PPP1R26Q5T8A7 1209 aaPredicted RBP8.04□□□□□ -1.12
CUX1-219ENST00000606749 PMS2CLQ68D20 193 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 KRT39Q6A163 491 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 IL31Q6EBC2 164 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 C11orf74Q86VG3 221 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 TTC30AQ86WT1 665 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 ABCA7Q8IZY2 2146 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 ZNF276Q8N554 614 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 CCDC150Q8NCX0 1101 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 OLIG1Q8TAK6 271 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 RLN3Q8WXF3 142 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 EEF2KMTQ96G04 330 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 FAXDC2Q96IV6 333 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 HEXIM2Q96MH2 286 aaKnown RBP8.04□□□□□ -1.12
CUX1-219ENST00000606749 CNTNAP3BQ96NU0 1288 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 DUSP16Q9BY84 665 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 CNTNAP3Q9BZ76 1288 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 NIF3L1Q9GZT8 377 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 MMRN2Q9H8L6 949 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 NMUR1Q9HB89 426 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 GDPD2Q9HCC8 539 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 PNPLA8Q9NP80 782 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 ZDHHC4Q9NPG8 344 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 DEC1Q9P2X7 70 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 NUDT5Q9UKK9 219 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 PCDHA5Q9Y5H7 936 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 USP3Q9Y6I4 520 aa8.04□□□□□ -1.12
CUX1-219ENST00000606749 SPAG17Q6Q759 2223 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 A0A1W2PQH9 124 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 TRIM24O15164 1050 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 RARGP13631 454 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 P2RY2P41231 377 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 PRCPP42785 496 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 PNOCQ13519 176 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 ZNF394Q53GI3 561 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 TCEAL6Q6IPX3 200 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 KLHDC10Q6PID8 442 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 NUDT18Q6ZVK8 323 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 SCD5Q86SK9 330 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 SMYD4Q8IYR2 804 aaPredicted RBP8.03□□□□□ -1.12
CUX1-219ENST00000606749 FMR1NBQ8N0W7 255 aaPredicted RBP8.03□□□□□ -1.12
CUX1-219ENST00000606749 FRMD1Q8N878 549 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 FBXL13Q8NEE6 735 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 TATDN2Q93075 761 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 TCEAL3Q969E4 200 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 JAKMIP2Q96AA8 810 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 TMEM176AQ96HP8 235 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 LSM14BQ9BX40 385 aaKnown RBP8.03□□□□□ -1.12
CUX1-219ENST00000606749 UBXN6Q9BZV1 441 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 POLMQ9NP87 494 aaPredicted RBP8.03□□□□□ -1.12
CUX1-219ENST00000606749 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.03□□□□□ -1.12
CUX1-219ENST00000606749 RAB20Q9NX57 234 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 WDR35Q9P2L0 1181 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 DNMT3LQ9UJW3 386 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 HCN2Q9UL51 889 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 STARD13Q9Y3M8 1113 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 KIAA1549LQ6ZVL6 1849 aa8.03□□□□□ -1.12
CUX1-219ENST00000606749 MYH10P35580 1976 aa8.02□□□□□ -1.12
CUX1-219ENST00000606749 NEDD8-MDP1E9PL57 170 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 KHNYNO15037 678 aaKnown RBP8.02□□□□□ -1.13
CUX1-219ENST00000606749 MDM4O15151 490 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 CETN3O15182 167 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 MAP3K13O43283 966 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 CACNG3O60359 315 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 STX10O60499 249 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 STC2O76061 302 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 KLKB1P03952 638 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 CISD3P0C7P0 127 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 EPB41P11171 864 aaKnown RBP8.02□□□□□ -1.13
CUX1-219ENST00000606749 RALAP11233 206 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 TYRP14679 529 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 DHPSP49366 369 aaPredicted RBP8.02□□□□□ -1.13
CUX1-219ENST00000606749 PSEN1P49768 467 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 RAD23BP54727 409 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 IRX4P78413 519 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 GOLGA8FQ08AF8 430 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 GOLGA8DPQ0D2H9 430 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 BYSLQ13895 437 aaKnown RBP8.02□□□□□ -1.13
CUX1-219ENST00000606749 MAP7D1Q3KQU3 841 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 C10orf120Q5SQS8 335 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 C10orf76Q5T2E6 689 aa8.02□□□□□ -1.13
CUX1-219ENST00000606749 N4BP2L1Q5TBK1 243 aaPredicted RBP8.02□□□□□ -1.13
CUX1-219ENST00000606749 ZNF658Q5TYW1 1059 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms