RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 PPP1R15BQ5SWA1 713 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 BSPRYQ5W0U4 402 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 TXNDC8Q6A555 127 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 CES5AQ6NT32 575 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 H2AFVQ71UI9 128 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 GET4Q7L5D6 327 aaPredicted RBP8.05□□□□□ -1.12
MSH6-211ENST00000606499 MON1AQ86VX9 555 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 ZDHHC17Q8IUH5 632 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 SCML4Q8N228 414 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 EMC1Q8N766 993 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 C3orf20Q8ND61 904 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 CTNNBL1Q8WYA6 563 aaPredicted RBP8.05□□□□□ -1.12
MSH6-211ENST00000606499 OVCA2Q8WZ82 227 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 HLA-CQ95604 372 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 VCPIP1Q96JH7 1222 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 MCEEQ96PE7 176 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 GCNAQ96QF7 691 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 SLC22A12Q96S37 553 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 TRIM7Q9C029 511 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 ATXN3LQ9H3M9 355 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 POMKQ9H5K3 350 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 TRPC7Q9HCX4 862 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 PRDM6Q9NQX0 595 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 TLR8Q9NR97 1041 aaKnown RBP8.05□□□□□ -1.12
MSH6-211ENST00000606499 TRPM5Q9NZQ8 1165 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 NUDT5Q9UKK9 219 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 MRPS23Q9Y3D9 190 aaKnown RBP8.05□□□□□ -1.12
MSH6-211ENST00000606499 USP15Q9Y4E8 981 aaPredicted RBP8.05□□□□□ -1.12
MSH6-211ENST00000606499 PCDHA13Q9Y5I0 950 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 ADGRG1Q9Y653 693 aa8.05□□□□□ -1.12
MSH6-211ENST00000606499 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.05□□□□□ -1.12
MSH6-211ENST00000606499 KIF26AQ9ULI4 1882 aaPredicted RBP8.04□□□□□ -1.12
MSH6-211ENST00000606499 VCANP13611 3396 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 MDM4O15151 490 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 COCHO43405 550 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 TLR5O60602 858 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 HSF2BPO75031 334 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 FGF19O95750 216 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 TBX18O95935 607 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 CYP1A2P05177 515 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 MYBL1P10243 752 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 KRT3P12035 628 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 NCAM1P13591 858 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 RARGP13631 454 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 TFE3P19532 575 aaPredicted RBP8.04□□□□□ -1.12
MSH6-211ENST00000606499 FSHRP23945 695 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 RFC1P35251 1148 aaPredicted RBP8.04□□□□□ -1.12
MSH6-211ENST00000606499 SCNN1AP37088 669 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 MTHFRP42898 656 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 VAV2P52735 878 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 TFF2Q03403 129 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 MAMLD1Q13495 774 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 CBX2Q14781 532 aaPredicted RBP8.04□□□□□ -1.12
MSH6-211ENST00000606499 C10orf76Q5T2E6 689 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 GPR158Q5T848 1215 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 OTUD1Q5VV17 481 aaPredicted RBP8.04□□□□□ -1.12
MSH6-211ENST00000606499 SNX30Q5VWJ9 437 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 SYPL2Q5VXT5 272 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 BTBD8Q5XKL5 378 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 PLEKHA7Q6IQ23 1121 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 POTEHQ6S545 545 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 RSRC2Q7L4I2 434 aaKnown RBP8.04□□□□□ -1.12
MSH6-211ENST00000606499 KIAA1328Q86T90 577 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 NPAS3Q8IXF0 933 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 DEFB106AQ8N104 65 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 ARHGAP18Q8N392 663 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 LEMD2Q8NC56 503 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 ADAM32Q8TC27 787 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 MRPS31Q92665 395 aaKnown RBP8.04□□□□□ -1.12
MSH6-211ENST00000606499 GOLGA1Q92805 767 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 RIPOR3Q96MK2 946 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 SLC2A13Q96QE2 648 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 CYP2S1Q96SQ9 504 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 SELENOOQ9BVL4 669 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 NUP85Q9BW27 656 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 ADAM33Q9BZ11 813 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 LACRTQ9GZZ8 138 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 SLITRK6Q9H5Y7 841 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 POPDC2Q9HBU9 364 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 WDR6Q9NNW5 1121 aaKnown RBP8.04□□□□□ -1.12
MSH6-211ENST00000606499 OSGEPQ9NPF4 335 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 AVENQ9NQS1 362 aaPredicted RBP8.04□□□□□ -1.12
MSH6-211ENST00000606499 ABCC13Q9NSE7 274 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 PARVAQ9NVD7 372 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.04□□□□□ -1.12
MSH6-211ENST00000606499 ASNSD1Q9NWL6 643 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 CLIC5Q9NZA1 410 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 WDR35Q9P2L0 1181 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 TRIM10Q9UDY6 481 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 TMEM59LQ9UK28 342 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 PYCARDQ9ULZ3 195 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 COG5Q9UP83 839 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 NAALADL1Q9UQQ1 740 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 SCINQ9Y6U3 715 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 BRWD1Q9NSI6 2320 aa8.04□□□□□ -1.12
MSH6-211ENST00000606499 COL4A3Q01955 1670 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 TMEM191CA6NGB0 347 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 C2CD4BA6NLJ0 364 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 SIGLEC16A6NMB1 481 aa8.03□□□□□ -1.12
MSH6-211ENST00000606499 ZNF197O14709 1029 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms