RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 VCPIP1Q96JH7 1222 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 MFSD14AQ96MC6 490 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 PCDH18Q9HCL0 1135 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 SMYD2Q9NRG4 433 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 THAP1Q9NVV9 213 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 TUBGCP4Q9UGJ1 667 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 PSMD13Q9UNM6 376 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 SORCS3Q9UPU3 1222 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 GNEQ9Y223 722 aaKnown RBP12.89□□□□□ -0.35
CDCA3-212ENST00000604599 SSX2IPQ9Y2D8 614 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 CEPT1Q9Y6K0 416 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 GNPATO15228 680 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 P4HBP07237 508 aaKnown RBP12.89□□□□□ -0.35
CDCA3-212ENST00000604599 FAM58BPP0C7Q3 252 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 RBP3P10745 1247 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 ACO1P21399 889 aaKnown RBP12.89□□□□□ -0.35
CDCA3-212ENST00000604599 CD97P48960 835 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 SOX10P56693 466 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 APOFQ13790 326 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 DPYSL3Q14195 570 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 RARS2Q5T160 578 aaKnown RBP12.89□□□□□ -0.35
CDCA3-212ENST00000604599 LRRC38Q5VT99 294 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 C16orf46Q6P387 395 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 TRIM72Q6ZMU5 477 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 USP37Q86T82 979 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 CERS5Q8N5B7 392 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 SMYD1Q8NB12 490 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 TMEM161BQ8NDZ6 487 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 LRGUKQ96M69 825 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 ZNF696Q9H7X3 374 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 INIPQ9NRY2 104 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 HOMER2Q9NSB8 354 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 EXOC7Q9UPT5 735 aa12.89□□□□□ -0.35
CDCA3-212ENST00000604599 ADAMTSL1Q8N6G6 1762 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 NRAPQ86VF7 1730 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 C3orf70A6NLC5 250 aaPredicted RBP12.88□□□□□ -0.35
CDCA3-212ENST00000604599 HNRNPDLO14979 420 aaKnown RBP12.88□□□□□ -0.35
CDCA3-212ENST00000604599 OATP04181 439 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 MMP8P22894 467 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 YWHABP31946 246 aaKnown RBP12.88□□□□□ -0.35
CDCA3-212ENST00000604599 NR1H2P55055 460 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 WNT7BP56706 349 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 EIF3EP60228 445 aaKnown RBP12.88□□□□□ -0.35
CDCA3-212ENST00000604599 CDKL1Q00532 357 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 FASTKD1Q53R41 847 aaKnown RBP12.88□□□□□ -0.35
CDCA3-212ENST00000604599 CYP4A22Q5TCH4 519 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 PDPK2PQ6A1A2 396 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 MAVSQ7Z434 540 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 AMIGO3Q86WK7 504 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 MAP4K3Q8IVH8 894 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 TMIGD2Q96BF3 282 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 COPS7BQ9H9Q2 264 aaPredicted RBP12.88□□□□□ -0.35
CDCA3-212ENST00000604599 PFDN4Q9NQP4 134 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 PLK2Q9NYY3 685 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 RAB26Q9ULW5 256 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 DCXO43602 365 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 C1QAP02745 245 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 CSH1P0DML2 217 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 CSH2P0DML3 217 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 TSHRP16473 764 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 ATP2B4P23634 1241 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 ALDH1B1P30837 517 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 NPTX2P47972 431 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 CCR3P51677 355 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 FAXCQ5TGI0 409 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 NCCRP1Q6ZVX7 275 aaPredicted RBP12.88□□□□□ -0.35
CDCA3-212ENST00000604599 PTF1AQ7RTS3 328 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 ANKRD23Q86SG2 305 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 APOBEC3GQ9HC16 384 aaKnown RBP12.88□□□□□ -0.35
CDCA3-212ENST00000604599 FAIMQ9NVQ4 179 aa12.88□□□□□ -0.35
CDCA3-212ENST00000604599 DDX56Q9NY93 547 aaKnown RBP12.88□□□□□ -0.35
CDCA3-212ENST00000604599 C6orf203Q9P0P8 240 aaPredicted RBP12.88□□□□□ -0.35
CDCA3-212ENST00000604599 ZNF536O15090 1300 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 ASTN2O75129 1339 aaPredicted RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 DDTLA6NHG4 134 aaPredicted RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 ZC3H11AO75152 810 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 FBXO21O94952 628 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 ATP5BP06576 529 aaKnown RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 NELFEP18615 380 aaKnown RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 L1CAMP32004 1257 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 PTPN7P35236 360 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 MTTPP55157 894 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 CDK18Q07002 472 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 C16orf72Q14CZ0 275 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 UGCGQ16739 394 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 PPP6R3Q5H9R7 873 aaPredicted RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 TDRD10Q5VZ19 366 aaKnown RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 TATDN1Q6P1N9 297 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 PATL1Q86TB9 770 aaKnown RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 RAB3IL1Q8TBN0 382 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 ST6GALNAC4Q9H4F1 302 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 PNPOQ9NVS9 261 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 ZC3H7BQ9UGR2 993 aaKnown RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 RSL24D1Q9UHA3 163 aaKnown RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 HERC5Q9UII4 1024 aaKnown RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 BARX2Q9UMQ3 279 aaPredicted RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 XPO1O14980 1071 aaKnown RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 TBC1D12O60347 775 aa12.87□□□□□ -0.35
CDCA3-212ENST00000604599 VIL1P09327 827 aaKnown RBP12.87□□□□□ -0.35
CDCA3-212ENST00000604599 PDGFRBP09619 1106 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms