RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 HOXD13P35453 343 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 GSSP48637 474 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 CARSP49589 748 aaKnown RBP4.91□□□□□ -1.62
LINC01109-201ENST00000603837 BCAP31P51572 246 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 SLC26A5P58743 744 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 GPR85P60893 370 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 MAGOHP61326 146 aaKnown RBP4.91□□□□□ -1.62
LINC01109-201ENST00000603837 NOP14P78316 857 aaKnown RBP4.91□□□□□ -1.62
LINC01109-201ENST00000603837 RNASELQ05823 741 aaKnown RBP4.91□□□□□ -1.62
LINC01109-201ENST00000603837 CCINQ13939 588 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 DHX34Q14147 1143 aaKnown RBP4.91□□□□□ -1.62
LINC01109-201ENST00000603837 C2orf27AQ580R0 203 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 SGO1Q5FBB7 561 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 FAM47CQ5HY64 1035 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 TUBA3EQ6PEY2 450 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 KIF6Q6ZMV9 814 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 STK32CQ86UX6 486 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 CLVS1Q8IUQ0 354 aaPredicted RBP4.91□□□□□ -1.62
LINC01109-201ENST00000603837 ANKRD53Q8N9V6 530 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 FAM13CQ8NE31 585 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 CFAP61Q8NHU2 1237 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 RHPN1Q8TCX5 695 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 CALML6Q8TD86 181 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 PEX13Q92968 403 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 UTP4Q969X6 686 aaKnown RBP4.91□□□□□ -1.62
LINC01109-201ENST00000603837 GTPBP3Q969Y2 492 aaKnown RBP4.91□□□□□ -1.62
LINC01109-201ENST00000603837 MAGOHBQ96A72 148 aaKnown RBP4.91□□□□□ -1.62
LINC01109-201ENST00000603837 DGCR14Q96DF8 476 aaKnown RBP4.91□□□□□ -1.62
LINC01109-201ENST00000603837 MFSD3Q96ES6 412 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 ADAD1Q96M93 576 aaKnown RBP4.91□□□□□ -1.62
LINC01109-201ENST00000603837 NLRP4Q96MN2 994 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 LSM14BQ9BX40 385 aaKnown RBP4.91□□□□□ -1.62
LINC01109-201ENST00000603837 SMARCAD1Q9H4L7 1026 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 C12orf4Q9NQ89 552 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 SDHAF3Q9NRP4 125 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 RASSF1Q9NS23 344 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 NKIRAS2Q9NYR9 191 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 SUCOQ9UBS9 1254 aaKnown RBP4.91□□□□□ -1.62
LINC01109-201ENST00000603837 ANGPTL2Q9UKU9 493 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 BAG5Q9UL15 447 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 PCDHA7Q9UN72 937 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 USP15Q9Y4E8 981 aaPredicted RBP4.91□□□□□ -1.62
LINC01109-201ENST00000603837 TELO2Q9Y4R8 837 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 NR2E3Q9Y5X4 410 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 SESN1Q9Y6P5 492 aa4.91□□□□□ -1.62
LINC01109-201ENST00000603837 USP6P35125 1406 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 ZMYM6O95789 1325 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 NEDD4P46934 1319 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 A0A088AWK7 358 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 CCDC78A2IDD5 438 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 MINDY4BA8MYZ0 360 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 PDPK1O15530 556 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 STRNO43815 780 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 KRT75O95678 551 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 CHEK2O96017 543 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 FYNP06241 537 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 SNRPA1P09661 255 aaKnown RBP4.9□□□□□ -1.62
LINC01109-201ENST00000603837 RCVRNP35243 200 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 IGHMBP2P38935 993 aaKnown RBP4.9□□□□□ -1.62
LINC01109-201ENST00000603837 FXR1P51114 621 aaKnown RBP eCLIP4.9□□□□□ -1.62
LINC01109-201ENST00000603837 ERVK-24P63145 666 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 OTUD4Q01804 1114 aaKnown RBP4.9□□□□□ -1.62
LINC01109-201ENST00000603837 NIPAL4Q0D2K0 466 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 MXD4Q14582 209 aaPredicted RBP4.9□□□□□ -1.62
LINC01109-201ENST00000603837 LASP1Q14847 261 aaKnown RBP4.9□□□□□ -1.62
LINC01109-201ENST00000603837 ADCK5Q3MIX3 580 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 PERM1Q5SV97 790 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 C1orf53Q5VUE5 145 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 CCDC62Q6P9F0 684 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 TREML4Q6UXN2 200 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 LRRC74BQ6ZQY2 392 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 UNC5CLQ8IV45 518 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 NATD1Q8N6N6 113 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 SPATA4Q8NEY3 305 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 OR2W6PQ8NHA6 318 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 DDX54Q8TDD1 881 aaKnown RBP4.9□□□□□ -1.62
LINC01109-201ENST00000603837 EFHD2Q96C19 240 aaPredicted RBP4.9□□□□□ -1.62
LINC01109-201ENST00000603837 HS6ST2Q96MM7 605 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 ZIC5Q96T25 663 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 ZNF184Q99676 751 aaPredicted RBP4.9□□□□□ -1.62
LINC01109-201ENST00000603837 EPB41L1Q9H4G0 881 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 GORASP2Q9H8Y8 452 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 TXLNGQ9NUQ3 528 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 PPARGC1AQ9UBK2 798 aaKnown RBP4.9□□□□□ -1.62
LINC01109-201ENST00000603837 FETUBQ9UGM5 382 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 GRID1Q9ULK0 1009 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 ERVK-19Q9WJR5 959 aa4.9□□□□□ -1.62
LINC01109-201ENST00000603837 ABCA3Q99758 1704 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 A0A1B0GVC2 190 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 NCF1BA6NI72 391 aaPredicted RBP4.9□□□□□ -1.63
LINC01109-201ENST00000603837 NCF1CA8MVU1 366 aaPredicted RBP4.9□□□□□ -1.63
LINC01109-201ENST00000603837 PFDN6O15212 129 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 OR6B1O95007 311 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 POLR2MP0CAP2 368 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 VSIG8P0DPA2 414 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 EEF2P13639 858 aaKnown RBP4.9□□□□□ -1.63
LINC01109-201ENST00000603837 CCNB1P14635 433 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 PSMA4P25789 261 aaKnown RBP4.9□□□□□ -1.63
LINC01109-201ENST00000603837 GTF2H1P32780 548 aa4.9□□□□□ -1.63
LINC01109-201ENST00000603837 ETV1P50549 477 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms