RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 ANO4Q32M45 955 aa22.39■■□□□ 1.17
PPFIA3-209ENST00000602783 HSF5Q4G112 596 aaPredicted RBP22.39■■□□□ 1.17
PPFIA3-209ENST00000602783 PMS2CLQ68D20 193 aa22.39■■□□□ 1.17
PPFIA3-209ENST00000602783 RNF43Q68DV7 783 aa22.39■■□□□ 1.17
PPFIA3-209ENST00000602783 TMEM25Q86YD3 366 aa22.39■■□□□ 1.17
PPFIA3-209ENST00000602783 ERCC4Q92889 916 aaPredicted RBP22.39■■□□□ 1.17
PPFIA3-209ENST00000602783 EEF2KMTQ96G04 330 aa22.39■■□□□ 1.17
PPFIA3-209ENST00000602783 TWNKQ96RR1 684 aa22.39■■□□□ 1.17
PPFIA3-209ENST00000602783 HNRNPABQ99729 332 aaKnown RBP22.39■■□□□ 1.17
PPFIA3-209ENST00000602783 APOBEC3GQ9HC16 384 aaKnown RBP22.39■■□□□ 1.17
PPFIA3-209ENST00000602783 TMEM8AQ9HCN3 771 aa22.39■■□□□ 1.17
PPFIA3-209ENST00000602783 POLMQ9NP87 494 aaPredicted RBP22.39■■□□□ 1.17
PPFIA3-209ENST00000602783 SPHK2Q9NRA0 654 aa22.39■■□□□ 1.17
PPFIA3-209ENST00000602783 CHRM1P11229 460 aaPredicted RBP22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 BCKDHBP21953 392 aa22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 PRCPP42785 496 aa22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 EOGTQ5NDL2 527 aa22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 ZNF658Q5TYW1 1059 aaPredicted RBP22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 CLEC20AQ6ZU45 233 aa22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 GPRIN1Q7Z2K8 1008 aa22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 ETFBKMTQ8IXQ9 262 aa22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 PHTF2Q8N3S3 785 aa22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 JAKMIP2Q96AA8 810 aa22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 CYFIP2Q96F07 1278 aa22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 GSDMAQ96QA5 445 aa22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 NT5C1AQ9BXI3 368 aa22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 NIF3L1Q9GZT8 377 aa22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 DEC1Q9P2X7 70 aa22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 CIZ1Q9ULV3 898 aaPredicted RBP22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 THADAQ6YHU6 1953 aa22.38■■□□□ 1.17
PPFIA3-209ENST00000602783 HOXC11O43248 304 aaPredicted RBP22.37■■□□□ 1.17
PPFIA3-209ENST00000602783 TULP3O75386 442 aa22.37■■□□□ 1.17
PPFIA3-209ENST00000602783 SMC2O95347 1197 aa22.37■■□□□ 1.17
PPFIA3-209ENST00000602783 EPB41P11171 864 aaKnown RBP22.37■■□□□ 1.17
PPFIA3-209ENST00000602783 INCA1Q0VD86 236 aa22.37■■□□□ 1.17
PPFIA3-209ENST00000602783 COBLL1Q53SF7 1204 aa22.37■■□□□ 1.17
PPFIA3-209ENST00000602783 RLN3Q8WXF3 142 aa22.37■■□□□ 1.17
PPFIA3-209ENST00000602783 SMARCE1Q969G3 411 aa22.37■■□□□ 1.17
PPFIA3-209ENST00000602783 DUSP9Q99956 384 aaKnown RBP22.37■■□□□ 1.17
PPFIA3-209ENST00000602783 KLF16Q9BXK1 252 aaPredicted RBP22.37■■□□□ 1.17
PPFIA3-209ENST00000602783 CYP3A43Q9HB55 503 aa22.37■■□□□ 1.17
PPFIA3-209ENST00000602783 BCCIPQ9P287 314 aaKnown RBP eCLIP22.37■■□□□ 1.17
PPFIA3-209ENST00000602783 HHLA1C9JL84 531 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 CETN3O15182 167 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 ADAM23O75077 832 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 CD58P19256 250 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 ACO1P21399 889 aaKnown RBP22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 GTF2H1P32780 548 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 ATP5C1P36542 298 aaKnown RBP22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 DHPSP49366 369 aaPredicted RBP22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 PREPLQ4J6C6 727 aaPredicted RBP22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 KRT39Q6A163 491 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 HTR3DQ70Z44 454 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 CCDC150Q8NCX0 1101 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 OLIG1Q8TAK6 271 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 SPATA20Q8TB22 786 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 WHAMMQ8TF30 809 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 TIGD1Q96MW7 591 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 TSG101Q99816 390 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 EDEM2Q9BV94 578 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 OSER1Q9NX31 292 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 SCML2Q9UQR0 700 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 PCDHA5Q9Y5H7 936 aa22.36■■□□□ 1.17
PPFIA3-209ENST00000602783 LAMA1P25391 3075 aa22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 TRIM24O15164 1050 aa22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 CYP26A1O43174 497 aa22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 MXI1P50539 228 aa22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 MCCD1P59942 119 aaPredicted RBP22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 N4BP2L1Q5TBK1 243 aaPredicted RBP22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 NUDT18Q6ZVK8 323 aa22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 CYP2U1Q7Z449 544 aa22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 PGBD3Q8N328 593 aa22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 ZNF513Q8N8E2 541 aaPredicted RBP22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 HMGB4Q8WW32 186 aa22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 LSM14BQ9BX40 385 aaKnown RBP22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 NMUR1Q9HB89 426 aa22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 CYLDQ9NQC7 956 aa22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 HOOK1Q9UJC3 728 aaKnown RBP22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 CACNA1BQ00975 2339 aa22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 EPG5Q9HCE0 2579 aa22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 NUP205Q92621 2012 aa22.35■■□□□ 1.17
PPFIA3-209ENST00000602783 GON4LQ3T8J9 2241 aa22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 A0A1W2PQH9 124 aa22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 TCRBV21S2A2A0A5A6 115 aa22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 MAP3K13O43283 966 aa22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 GREM1O60565 184 aa22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 CILPO75339 1184 aa22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 P2RY2P41231 377 aa22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 GOLGA8FQ08AF8 430 aa22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 GOLGA8DPQ0D2H9 430 aa22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 C10orf76Q5T2E6 689 aa22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 ZC3H3Q8IXZ2 948 aaKnown RBP22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 FRMD1Q8N878 549 aa22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 TERB1Q8NA31 727 aa22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 SEMA4DQ92854 862 aa22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 LSM7Q9UK45 103 aaKnown RBP22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 NUDT5Q9UKK9 219 aa22.34■■□□□ 1.17
PPFIA3-209ENST00000602783 TRIM49BA6NDI0 452 aa22.33■■□□□ 1.17
PPFIA3-209ENST00000602783 C4orf47A7E2U8 309 aa22.33■■□□□ 1.17
PPFIA3-209ENST00000602783 KHNYNO15037 678 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms