RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 RGS7P49802 495 aa17.57■□□□□ 0.4
SSBP4-213ENST00000602088 YWHAGP61981 247 aaKnown RBP eCLIP17.57■□□□□ 0.4
SSBP4-213ENST00000602088 AMPD2Q01433 879 aa17.57■□□□□ 0.4
SSBP4-213ENST00000602088 NR1H3Q13133 447 aa17.57■□□□□ 0.4
SSBP4-213ENST00000602088 C10orf120Q5SQS8 335 aa17.57■□□□□ 0.4
SSBP4-213ENST00000602088 TADA2BQ86TJ2 420 aa17.57■□□□□ 0.4
SSBP4-213ENST00000602088 SIX6OS1Q8N1H7 587 aa17.57■□□□□ 0.4
SSBP4-213ENST00000602088 SCML4Q8N228 414 aa17.57■□□□□ 0.4
SSBP4-213ENST00000602088 AOPEPQ8N6M6 819 aa17.57■□□□□ 0.4
SSBP4-213ENST00000602088 WBP2Q969T9 261 aa17.57■□□□□ 0.4
SSBP4-213ENST00000602088 HSFY1Q96LI6 401 aa17.57■□□□□ 0.4
SSBP4-213ENST00000602088 CDK5RAP1Q96SZ6 601 aaKnown RBP17.57■□□□□ 0.4
SSBP4-213ENST00000602088 BPIFA3Q9BQP9 254 aa17.57■□□□□ 0.4
SSBP4-213ENST00000602088 LMAN1LQ9HAT1 526 aa17.57■□□□□ 0.4
SSBP4-213ENST00000602088 CNGB3Q9NQW8 809 aa17.57■□□□□ 0.4
SSBP4-213ENST00000602088 TBC1D14Q9P2M4 693 aa17.57■□□□□ 0.4
SSBP4-213ENST00000602088 LRRC10BA6NIK2 292 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 H0Y858 1186 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 SCAMP3O14828 347 aaKnown RBP17.56■□□□□ 0.4
SSBP4-213ENST00000602088 MDM4O15151 490 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 THAP12O43422 761 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 MED7O43513 233 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 LCP1P13796 627 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 COPB1P53618 953 aaKnown RBP17.56■□□□□ 0.4
SSBP4-213ENST00000602088 PON2Q15165 354 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 ANGPT1Q15389 498 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 DENND1BQ6P3S1 775 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 HTR3DQ70Z44 454 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 ANKRD20A12PQ8NF67 263 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 NDRG1Q92597 394 aaKnown RBP17.56■□□□□ 0.4
SSBP4-213ENST00000602088 OTUB2Q96DC9 234 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 FUCA2Q9BTY2 467 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 LSM14BQ9BX40 385 aaKnown RBP17.56■□□□□ 0.4
SSBP4-213ENST00000602088 NAA15Q9BXJ9 866 aaKnown RBP17.56■□□□□ 0.4
SSBP4-213ENST00000602088 PLCB1Q9NQ66 1216 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 SH3BP1Q9Y3L3 701 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 FHOD1Q9Y613 1164 aa17.56■□□□□ 0.4
SSBP4-213ENST00000602088 CACNA1IQ9P0X4 2223 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 YJEFN3A6XGL0 299 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 E7ENQ6 273 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 TRDMT1O14717 391 aaKnown RBP17.55■□□□□ 0.4
SSBP4-213ENST00000602088 GREM1O60565 184 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 IRF1P10914 325 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 UCHL3P15374 230 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 CDK11BP21127 795 aaKnown RBP17.55■□□□□ 0.4
SSBP4-213ENST00000602088 CLCN1P35523 988 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 RPL34P49207 117 aaKnown RBP17.55■□□□□ 0.4
SSBP4-213ENST00000602088 DAOAP59103 153 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 PTK2Q05397 1052 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 FKBP15Q5T1M5 1219 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 C1orf210Q8IVY1 113 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 FAM71AQ8IYT1 594 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 STK32AQ8WU08 396 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 IRF2BPLQ9H1B7 796 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 CHRDQ9H2X0 955 aa17.55■□□□□ 0.4
SSBP4-213ENST00000602088 VPS13AQ96RL7 3174 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 PIK3R2O00459 728 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 CYP17A1P05093 508 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 PNMA6AP0CW24 399 aaPredicted RBP17.54■□□□□ 0.4
SSBP4-213ENST00000602088 GALK1P51570 392 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 NHLH1Q02575 133 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 GOLGA8FQ08AF8 430 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 GOLGA8DPQ0D2H9 430 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 RAPGEF1Q13905 1077 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 CCINQ13939 588 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 LRRC32Q14392 662 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 DRAP1Q14919 205 aaPredicted RBP17.54■□□□□ 0.4
SSBP4-213ENST00000602088 DHCR24Q15392 516 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 TMEM196Q5HYL7 178 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 DGKKQ5KSL6 1271 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 BSPRYQ5W0U4 402 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 BTBD8Q5XKL5 378 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 RHBDF2Q6PJF5 856 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 APTXQ7Z2E3 356 aaKnown RBP17.54■□□□□ 0.4
SSBP4-213ENST00000602088 MIB1Q86YT6 1006 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 BBS7Q8IWZ6 715 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 DHX40Q8IX18 779 aaKnown RBP17.54■□□□□ 0.4
SSBP4-213ENST00000602088 IRGQQ8WZA9 623 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 FBRSL1Q9HCM7 1045 aaKnown RBP17.54■□□□□ 0.4
SSBP4-213ENST00000602088 ABCC13Q9NSE7 274 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 RBM12Q9NTZ6 932 aaKnown RBP17.54■□□□□ 0.4
SSBP4-213ENST00000602088 PCDHGC3Q9UN70 934 aa17.54■□□□□ 0.4
SSBP4-213ENST00000602088 SYCE3A1L190 88 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 SMTNL1A8MU46 457 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 FBXO21O94952 628 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 ATP1A3P13637 1013 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 ACADSBP45954 432 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 KLK7P49862 253 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 ZNF165P49910 485 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 BPIFB4P59827 614 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 COG7P83436 770 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 EFEMP1Q12805 493 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 MTAPQ13126 283 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 GAB4Q2WGN9 574 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 NAIF1Q69YI7 327 aaPredicted RBP17.53■□□□□ 0.4
SSBP4-213ENST00000602088 MAMSTRQ6ZN01 415 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 RSRC2Q7L4I2 434 aaKnown RBP17.53■□□□□ 0.4
SSBP4-213ENST00000602088 SLC47A2Q86VL8 602 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 P2RY13Q9BPV8 354 aa17.53■□□□□ 0.4
SSBP4-213ENST00000602088 IER2Q9BTL4 223 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms