RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 PIGZQ86VD9 579 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 TTC30AQ86WT1 665 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 TMC8Q8IU68 726 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 SYCE1Q8N0S2 351 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 ARHGAP18Q8N392 663 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 LRRC57Q8N9N7 239 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 TMEM35BQ8NCS4 154 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 ZMIZ2Q8NF64 920 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 TPCN2Q8NHX9 752 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 UBA3Q8TBC4 463 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 IPO4Q8TEX9 1081 aaKnown RBP10.58□□□□□ -0.72
UPF1-213ENST00000601981 GOLGA1Q92805 767 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 TRIM11Q96F44 468 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 HSFY1Q96LI6 401 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 TTLL2Q9BWV7 592 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 ATXN3LQ9H3M9 355 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 ACP6Q9NPH0 428 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 CYLDQ9NQC7 956 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 GDE1Q9NZC3 331 aa10.58□□□□□ -0.72
UPF1-213ENST00000601981 A0A1W2PRU2 124 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 TNFRSF10BO14763 440 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 SART1O43290 800 aaKnown RBP10.57□□□□□ -0.72
UPF1-213ENST00000601981 BEST1O76090 585 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 FBXO21O94952 628 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 CYP1A1P04798 512 aaPredicted RBP10.57□□□□□ -0.72
UPF1-213ENST00000601981 CYP1A2P05177 515 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 MYBL1P10243 752 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 IL9P15248 144 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 HMGA1P17096 107 aaKnown RBP10.57□□□□□ -0.72
UPF1-213ENST00000601981 PFKLP17858 780 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 ABCB4P21439 1286 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 HOXD11P31277 338 aaPredicted RBP10.57□□□□□ -0.72
UPF1-213ENST00000601981 PSEN1P49768 467 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 KCNQ1P51787 676 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 TKTL1P51854 596 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 GPC5P78333 572 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 NTHL1P78549 312 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 MTMR3Q13615 1198 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 MEI1Q5TIA1 1274 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 ACAD10Q6JQN1 1059 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 TADA2BQ86TJ2 420 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 DNAAF5Q86Y56 855 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 ADHFE1Q8IWW8 467 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 HS6ST3Q8IZP7 471 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 LRRN4CLQ8ND94 238 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 STK32AQ8WU08 396 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 UBE2Q2Q8WVN8 375 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 KCTD13Q8WZ19 329 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 ARHGEF26Q96DR7 871 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 RPGRIP1Q96KN7 1286 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 CDK5RAP1Q96SZ6 601 aaKnown RBP10.57□□□□□ -0.72
UPF1-213ENST00000601981 TRIM62Q9BVG3 475 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 TLR10Q9BXR5 811 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 THAP2Q9H0W7 228 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 LHX5Q9H2C1 402 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 SYNCQ9H7C4 482 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 ZNF334Q9HCZ1 680 aaPredicted RBP10.57□□□□□ -0.72
UPF1-213ENST00000601981 TLR8Q9NR97 1041 aaKnown RBP10.57□□□□□ -0.72
UPF1-213ENST00000601981 ST7Q9NRC1 585 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 TMEM30AQ9NV96 361 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 CDH7Q9ULB5 785 aa10.57□□□□□ -0.72
UPF1-213ENST00000601981 MYO10Q9HD67 2058 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 TTC28Q96AY4 2481 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 CTAGE15A4D2H0 777 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 TNFRSF10AO00220 468 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 CES2O00748 559 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 FTCDO95954 541 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 ZBED1O96006 694 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 CTAGE8P0CG41 777 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 UNGP13051 313 aaPredicted RBP10.56□□□□□ -0.72
UPF1-213ENST00000601981 AVPR1AP37288 418 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 GPD2P43304 727 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 CENPCQ03188 943 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 ADIGQ0VDE8 80 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 TAF10Q12962 218 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 TEAD2Q15562 447 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 SLC5A9Q2M3M2 681 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 PKDCCQ504Y2 493 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 RAB41Q5JT25 222 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 PRSS36Q5K4E3 855 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 GPR158Q5T848 1215 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 C11orf63Q6NUN7 778 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 DENND1BQ6P3S1 775 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 GAREM2Q75VX8 874 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 MTSS1LQ765P7 747 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 RSRC2Q7L4I2 434 aaKnown RBP10.56□□□□□ -0.72
UPF1-213ENST00000601981 ZNF572Q7Z3I7 529 aaPredicted RBP10.56□□□□□ -0.72
UPF1-213ENST00000601981 CTAGE6Q86UF2 777 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 MON1AQ86VX9 555 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 PASD1Q8IV76 773 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 CTAGE4Q8IX94 777 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 SCML4Q8N228 414 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 SCAMP5Q8TAC9 235 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 SHKBP1Q8TBC3 707 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 SLC35G2Q8TBE7 412 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 SLC35F5Q8WV83 523 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 ING5Q8WYH8 240 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 UBXN4Q92575 508 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 FGF13Q92913 245 aa10.56□□□□□ -0.72
UPF1-213ENST00000601981 OSBPL9Q96SU4 736 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms