RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 GAREM1Q9H706 876 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 PRDM16Q9HAZ2 1276 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 EXOC7Q9UPT5 735 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 BTBD3Q9Y2F9 522 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 SLCO1B1Q9Y6L6 691 aa17.01■□□□□ 0.31
SSBP4-211ENST00000601614 KCNJ18B7U540 433 aa17■□□□□ 0.31
SSBP4-211ENST00000601614 CACNG3O60359 315 aa17■□□□□ 0.31
SSBP4-211ENST00000601614 CILPO75339 1184 aa17■□□□□ 0.31
SSBP4-211ENST00000601614 PTPN1P18031 435 aaKnown RBP17■□□□□ 0.31
SSBP4-211ENST00000601614 CD6P30203 668 aa17■□□□□ 0.31
SSBP4-211ENST00000601614 GNL1P36915 607 aaPredicted RBP17■□□□□ 0.31
SSBP4-211ENST00000601614 PREPLQ4J6C6 727 aaPredicted RBP17■□□□□ 0.31
SSBP4-211ENST00000601614 HECTD3Q5T447 861 aa17■□□□□ 0.31
SSBP4-211ENST00000601614 DBX2Q6ZNG2 339 aa17■□□□□ 0.31
SSBP4-211ENST00000601614 GPD1LQ8N335 351 aa17■□□□□ 0.31
SSBP4-211ENST00000601614 TOE1Q96GM8 510 aaKnown RBP17■□□□□ 0.31
SSBP4-211ENST00000601614 EPSTI1Q96J88 318 aa17■□□□□ 0.31
SSBP4-211ENST00000601614 KCNK16Q96T55 309 aa17■□□□□ 0.31
SSBP4-211ENST00000601614 GPR174Q9BXC1 333 aa17■□□□□ 0.31
SSBP4-211ENST00000601614 ELOVL4Q9GZR5 314 aa17■□□□□ 0.31
SSBP4-211ENST00000601614 TM7SF3Q9NS93 570 aa17■□□□□ 0.31
SSBP4-211ENST00000601614 WSB2Q9NYS7 404 aaPredicted RBP17■□□□□ 0.31
SSBP4-211ENST00000601614 PTPRQQ9UMZ3 2332 aa17■□□□□ 0.31
SSBP4-211ENST00000601614 GOLGA8CPA6NN73 597 aa16.99■□□□□ 0.31
SSBP4-211ENST00000601614 MEI4A8MW99 385 aa16.99■□□□□ 0.31
SSBP4-211ENST00000601614 NEDD8-MDP1E9PL57 170 aa16.99■□□□□ 0.31
SSBP4-211ENST00000601614 CST3P01034 146 aaPredicted RBP16.99■□□□□ 0.31
SSBP4-211ENST00000601614 ZNF883P0CG24 379 aa16.99■□□□□ 0.31
SSBP4-211ENST00000601614 NCAM1P13591 858 aa16.99■□□□□ 0.31
SSBP4-211ENST00000601614 LONP1P36776 959 aaKnown RBP16.99■□□□□ 0.31
SSBP4-211ENST00000601614 SNX30Q5VWJ9 437 aa16.99■□□□□ 0.31
SSBP4-211ENST00000601614 SDE2Q6IQ49 451 aa16.99■□□□□ 0.31
SSBP4-211ENST00000601614 CBWD2Q8IUF1 395 aa16.99■□□□□ 0.31
SSBP4-211ENST00000601614 OR6B3Q8NGW1 331 aa16.99■□□□□ 0.31
SSBP4-211ENST00000601614 MKRN2Q9H000 416 aaKnown RBP16.99■□□□□ 0.31
SSBP4-211ENST00000601614 MIR1-1HGQ9H1L0 117 aa16.99■□□□□ 0.31
SSBP4-211ENST00000601614 GMIPQ9P107 970 aa16.99■□□□□ 0.31
SSBP4-211ENST00000601614 USP36Q9P275 1121 aaKnown RBP16.99■□□□□ 0.31
SSBP4-211ENST00000601614 SEL1LQ9UBV2 794 aa16.99■□□□□ 0.31
SSBP4-211ENST00000601614 CYSRT1A8MQ03 144 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 ZBTB24O43167 697 aaPredicted RBP16.98■□□□□ 0.31
SSBP4-211ENST00000601614 TACC1O75410 805 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 PRPF6O94906 941 aaKnown RBP16.98■□□□□ 0.31
SSBP4-211ENST00000601614 CISD3P0C7P0 127 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 ZDHHC11BP0C7U3 371 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 TYRP14679 529 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 MATKP42679 507 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 HLA-BQ31612 363 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 FUT11Q495W5 492 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 TPGS1Q6ZTW0 290 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 NUDT18Q6ZVK8 323 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 SCUBE3Q8IX30 993 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 SYCP3Q8IZU3 236 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 PDZD8Q8NEN9 1154 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 C1orf216Q8TAB5 229 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 RHBDD1Q8TEB9 315 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 OVCA2Q8WZ82 227 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 BBS2Q9BXC9 721 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 SNX25Q9H3E2 840 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 IL37Q9NZH6 218 aa16.98■□□□□ 0.31
SSBP4-211ENST00000601614 RTN3O95197 1032 aaPredicted RBP16.97■□□□□ 0.31
SSBP4-211ENST00000601614 TNNC2P02585 160 aa16.97■□□□□ 0.31
SSBP4-211ENST00000601614 SLC5A3P53794 718 aa16.97■□□□□ 0.31
SSBP4-211ENST00000601614 C19orf57Q0VDD7 668 aa16.97■□□□□ 0.31
SSBP4-211ENST00000601614 DCAF12L1Q5VU92 463 aa16.97■□□□□ 0.31
SSBP4-211ENST00000601614 PAQR9Q6ZVX9 377 aa16.97■□□□□ 0.31
SSBP4-211ENST00000601614 HTR3DQ70Z44 454 aa16.97■□□□□ 0.31
SSBP4-211ENST00000601614 TRAPPC11Q7Z392 1133 aa16.97■□□□□ 0.31
SSBP4-211ENST00000601614 B3GALNT2Q8NCR0 500 aa16.97■□□□□ 0.31
SSBP4-211ENST00000601614 SCFD1Q8WVM8 642 aa16.97■□□□□ 0.31
SSBP4-211ENST00000601614 OLFML3Q9NRN5 406 aa16.97■□□□□ 0.31
SSBP4-211ENST00000601614 MARK1Q9P0L2 795 aa16.97■□□□□ 0.31
SSBP4-211ENST00000601614 R3HCC1Q9Y3T6 440 aaKnown RBP16.97■□□□□ 0.31
SSBP4-211ENST00000601614 NFE2L3Q9Y4A8 694 aa16.97■□□□□ 0.31
SSBP4-211ENST00000601614 STON1Q9Y6Q2 735 aa16.97■□□□□ 0.31
SSBP4-211ENST00000601614 MYLKQ15746 1914 aa16.97■□□□□ 0.31
SSBP4-211ENST00000601614 A0A1B0GVT2 93 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 FAM92AA1XBS5 289 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 GFRA2O00451 464 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 BCAT2O15382 392 aaPredicted RBP16.96■□□□□ 0.31
SSBP4-211ENST00000601614 FLRT2O43155 660 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 CER1O95813 267 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 TBX18O95935 607 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 GAP43P17677 238 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 ITPKBP27987 946 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 TUBP50607 506 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 PTPRNQ16849 979 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 DUOXA2Q1HG44 320 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 METTL3Q86U44 580 aaKnown RBP16.96■□□□□ 0.31
SSBP4-211ENST00000601614 PIP4K2CQ8TBX8 421 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 BHMTQ93088 406 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 DCBLD2Q96PD2 775 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 XPO6Q96QU8 1125 aaKnown RBP16.96■□□□□ 0.31
SSBP4-211ENST00000601614 UBL7Q96S82 380 aaPredicted RBP16.96■□□□□ 0.31
SSBP4-211ENST00000601614 KLF16Q9BXK1 252 aaPredicted RBP16.96■□□□□ 0.31
SSBP4-211ENST00000601614 ITM2CQ9NQX7 267 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 EIF2B4Q9UI10 523 aaKnown RBP16.96■□□□□ 0.31
SSBP4-211ENST00000601614 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.96■□□□□ 0.31
SSBP4-211ENST00000601614 PCDHB13Q9Y5F0 798 aa16.96■□□□□ 0.31
SSBP4-211ENST00000601614 KALRNO60229 2985 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms