RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 FECHP22830 423 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 FSHRP23945 695 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 CDC25CP30307 473 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 PGFP49763 221 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 CDK17Q00537 523 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 CENPCQ03188 943 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 MAPK8IP2Q13387 824 aaPredicted RBP19.8■□□□□ 0.76
CCDC9-205ENST00000600117 POTEHQ6S545 545 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 KIAA2013Q8IYS2 634 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 SIX5Q8N196 739 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 CPA5Q8WXQ8 436 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 OVCA2Q8WZ82 227 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 PPP1R13BQ96KQ4 1090 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 CHP1Q99653 195 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 ST7Q9NRC1 585 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 ZNHIT6Q9NWK9 470 aaKnown RBP19.8■□□□□ 0.76
CCDC9-205ENST00000600117 GMIPQ9P107 970 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 ANAPC1Q9H1A4 1944 aa19.8■□□□□ 0.76
CCDC9-205ENST00000600117 A0A1W2PRU2 124 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 FAM170AA1A519 330 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 ZNF197O14709 1029 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 PAPSS1O43252 624 aaPredicted RBP19.79■□□□□ 0.76
CCDC9-205ENST00000600117 ZBED1O96006 694 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 USP17L7P0C7H9 530 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 CEBPBP17676 345 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 EIF4A3P38919 411 aaKnown RBP19.79■□□□□ 0.76
CCDC9-205ENST00000600117 DAOAP59103 153 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 PTP4A2Q12974 167 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 TSR1Q2NL82 804 aaKnown RBP19.79■□□□□ 0.76
CCDC9-205ENST00000600117 ASTE1Q2TB18 679 aaPredicted RBP19.79■□□□□ 0.76
CCDC9-205ENST00000600117 SCD5Q86SK9 330 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 SIX6OS1Q8N1H7 587 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 CLEC4CQ8WTT0 213 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 NDRG1Q92597 394 aaKnown RBP19.79■□□□□ 0.76
CCDC9-205ENST00000600117 NOX5Q96PH1 765 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 SLITRK1Q96PX8 696 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 PANX2Q96RD6 677 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 KCNK12Q9HB15 430 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 NMUR1Q9HB89 426 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 CNGB3Q9NQW8 809 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 SEPT11Q9NVA2 429 aaKnown RBP19.79■□□□□ 0.76
CCDC9-205ENST00000600117 TAS2R14Q9NYV8 317 aa19.79■□□□□ 0.76
CCDC9-205ENST00000600117 MRPS23Q9Y3D9 190 aaKnown RBP19.79■□□□□ 0.76
CCDC9-205ENST00000600117 CACNA1IQ9P0X4 2223 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 SSU72P8A0A1W2PR75 194 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 ZNF840PA6NDX5 716 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 FBXO21O94952 628 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 MMP8P22894 467 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 GABRB2P47870 512 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 CYP4F8P98187 520 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 TEAD2Q15562 447 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 SNX30Q5VWJ9 437 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 ACAD10Q6JQN1 1059 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 ERICH1Q86X53 443 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 PHF13Q86YI8 300 aaPredicted RBP19.78■□□□□ 0.76
CCDC9-205ENST00000600117 PDZD8Q8NEN9 1154 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 ING5Q8WYH8 240 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 MIS12Q9H081 205 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 ATXN3LQ9H3M9 355 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 TRPM5Q9NZQ8 1165 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 CHORDC1Q9UHD1 332 aaPredicted RBP19.78■□□□□ 0.76
CCDC9-205ENST00000600117 ADAMTS1Q9UHI8 967 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 NENFQ9UMX5 172 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 DOCK8Q8NF50 2099 aa19.78■□□□□ 0.76
CCDC9-205ENST00000600117 CACNA1GO43497 2377 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 A0A087X0T9 212 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 A0A1W2PQH9 124 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 FAM228BP0C875 321 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 PPP3CCP48454 512 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 STXBP5Q5T5C0 1151 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 MMS22LQ6ZRQ5 1243 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 GET4Q7L5D6 327 aaPredicted RBP19.77■□□□□ 0.76
CCDC9-205ENST00000600117 SCUBE3Q8IX30 993 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 NPAS3Q8IXF0 933 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 IPO4Q8TEX9 1081 aaKnown RBP19.77■□□□□ 0.76
CCDC9-205ENST00000600117 IRGQQ8WZA9 623 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 GCNAQ96QF7 691 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 MYADMQ96S97 322 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 OSER1Q9NX31 292 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 DLL3Q9NYJ7 618 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 IGSF9Q9P2J2 1179 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 WNT16Q9UBV4 365 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 R4GN57 208 aa19.77■□□□□ 0.76
CCDC9-205ENST00000600117 YJEFN3A6XGL0 299 aa19.76■□□□□ 0.75
CCDC9-205ENST00000600117 E7ENQ6 273 aa19.76■□□□□ 0.75
CCDC9-205ENST00000600117 GZMAP12544 262 aa19.76■□□□□ 0.75
CCDC9-205ENST00000600117 NSFP46459 744 aaKnown RBP19.76■□□□□ 0.75
CCDC9-205ENST00000600117 C2CD6Q53TS8 623 aa19.76■□□□□ 0.75
CCDC9-205ENST00000600117 OLFML1Q6UWY5 402 aa19.76■□□□□ 0.75
CCDC9-205ENST00000600117 FAM183BPQ6ZVS7 135 aa19.76■□□□□ 0.75
CCDC9-205ENST00000600117 MON1BQ7L1V2 547 aa19.76■□□□□ 0.75
CCDC9-205ENST00000600117 MON1AQ86VX9 555 aa19.76■□□□□ 0.75
CCDC9-205ENST00000600117 XYLT1Q86Y38 959 aa19.76■□□□□ 0.75
CCDC9-205ENST00000600117 FGF13Q92913 245 aa19.76■□□□□ 0.75
CCDC9-205ENST00000600117 C18orf8Q96DM3 657 aa19.76■□□□□ 0.75
CCDC9-205ENST00000600117 PIWIL1Q96J94 861 aaKnown RBP19.76■□□□□ 0.75
CCDC9-205ENST00000600117 C11orf70Q9BRQ4 267 aa19.76■□□□□ 0.75
CCDC9-205ENST00000600117 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.76■□□□□ 0.75
CCDC9-205ENST00000600117 NHEJ1Q9H9Q4 299 aaPredicted RBP19.76■□□□□ 0.75
CCDC9-205ENST00000600117 TLR8Q9NR97 1041 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms