RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 PREPLQ4J6C6 727 aaPredicted RBP19.77■□□□□ 0.76
PNKP-213ENST00000599543 PPM1JQ5JR12 505 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 PLA2G2CQ5R387 149 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 ZNF658Q5TYW1 1059 aaPredicted RBP19.77■□□□□ 0.76
PNKP-213ENST00000599543 RASSF3Q86WH2 238 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 TXNDC5Q8NBS9 432 aaKnown RBP19.77■□□□□ 0.76
PNKP-213ENST00000599543 MDGA1Q8NFP4 955 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 GPT2Q8TD30 523 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 DDX1Q92499 740 aaKnown RBP19.77■□□□□ 0.76
PNKP-213ENST00000599543 CYFIP2Q96F07 1278 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 EEF2KMTQ96G04 330 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 DUSP9Q99956 384 aaKnown RBP19.77■□□□□ 0.76
PNKP-213ENST00000599543 APOBEC3GQ9HC16 384 aaKnown RBP19.77■□□□□ 0.76
PNKP-213ENST00000599543 TMEM8AQ9HCN3 771 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 VPS45Q9NRW7 570 aa19.77■□□□□ 0.76
PNKP-213ENST00000599543 ANTXRLA6NF34 631 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 CYP26A1O43174 497 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 CILPO75339 1184 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 KLF8O95600 359 aaPredicted RBP19.76■□□□□ 0.75
PNKP-213ENST00000599543 CD44P16070 742 aaKnown RBP19.76■□□□□ 0.75
PNKP-213ENST00000599543 BMP6P22004 513 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 PGFP49763 221 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 LIMK1P53667 647 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 ANO4Q32M45 955 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 KRT39Q6A163 491 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 GPRIN1Q7Z2K8 1008 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 IL17RCQ8NAC3 791 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 CLSTN2Q9H4D0 955 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 SMOC1Q9H4F8 434 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 PNPLA8Q9NP80 782 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 CYLDQ9NQC7 956 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 SPHK2Q9NRA0 654 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 SCML2Q9UQR0 700 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 INVSQ9Y283 1065 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 EPG5Q9HCE0 2579 aa19.76■□□□□ 0.75
PNKP-213ENST00000599543 A0A0A0MRY4 1105 aa19.75■□□□□ 0.75
PNKP-213ENST00000599543 TBC1D3BA6NDS4 549 aa19.75■□□□□ 0.75
PNKP-213ENST00000599543 HOXC11O43248 304 aaPredicted RBP19.75■□□□□ 0.75
PNKP-213ENST00000599543 ACO1P21399 889 aaKnown RBP19.75■□□□□ 0.75
PNKP-213ENST00000599543 KCNA4P22459 653 aa19.75■□□□□ 0.75
PNKP-213ENST00000599543 GTF2H1P32780 548 aa19.75■□□□□ 0.75
PNKP-213ENST00000599543 ATP5C1P36542 298 aaKnown RBP19.75■□□□□ 0.75
PNKP-213ENST00000599543 TNFRSF4P43489 277 aa19.75■□□□□ 0.75
PNKP-213ENST00000599543 EDRF1Q3B7T1 1238 aa19.75■□□□□ 0.75
PNKP-213ENST00000599543 ZCWPW2Q504Y3 356 aa19.75■□□□□ 0.75
PNKP-213ENST00000599543 EOGTQ5NDL2 527 aa19.75■□□□□ 0.75
PNKP-213ENST00000599543 NUDT18Q6ZVK8 323 aa19.75■□□□□ 0.75
PNKP-213ENST00000599543 NAT16Q8N8M0 369 aa19.75■□□□□ 0.75
PNKP-213ENST00000599543 POLMQ9NP87 494 aaPredicted RBP19.75■□□□□ 0.75
PNKP-213ENST00000599543 RXFP3Q9NSD7 469 aa19.75■□□□□ 0.75
PNKP-213ENST00000599543 BCCIPQ9P287 314 aaKnown RBP eCLIP19.75■□□□□ 0.75
PNKP-213ENST00000599543 DEC1Q9P2X7 70 aa19.75■□□□□ 0.75
PNKP-213ENST00000599543 CHD8Q9HCK8 2581 aa19.75■□□□□ 0.75
PNKP-213ENST00000599543 PLXND1Q9Y4D7 1925 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 TRIM49BA6NDI0 452 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 SGK1O00141 431 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 TULP3O75386 442 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 TBX18O95935 607 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 KIR2DL1P43626 348 aaPredicted RBP19.74■□□□□ 0.75
PNKP-213ENST00000599543 MXI1P50539 228 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 PMS1P54277 932 aaKnown RBP19.74■□□□□ 0.75
PNKP-213ENST00000599543 PMS2CLQ68D20 193 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 KLHL10Q6JEL2 608 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 TMEM92Q6UXU6 159 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 TMEM25Q86YD3 366 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 ETFBKMTQ8IXQ9 262 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 ELOA2Q8IYF1 753 aaPredicted RBP19.74■□□□□ 0.75
PNKP-213ENST00000599543 PHTF2Q8N3S3 785 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 WHAMMQ8TF30 809 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 WBP2Q969T9 261 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 SPACA7Q96KW9 195 aa19.74■□□□□ 0.75
PNKP-213ENST00000599543 KLF16Q9BXK1 252 aaPredicted RBP19.74■□□□□ 0.75
PNKP-213ENST00000599543 LSM7Q9UK45 103 aaKnown RBP19.74■□□□□ 0.75
PNKP-213ENST00000599543 BCLAF3A2AJT9 711 aaKnown RBP19.73■□□□□ 0.75
PNKP-213ENST00000599543 HHLA1C9JL84 531 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 GOLGA6L22H0YM25 854 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 STX10O60499 249 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 CAVIN2O95810 425 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 ADRB1P08588 477 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 EPB41P11171 864 aaKnown RBP19.73■□□□□ 0.75
PNKP-213ENST00000599543 MORC3Q14149 939 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 ZNF394Q53GI3 561 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 C10orf76Q5T2E6 689 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 STPG1Q5TH74 334 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 EMC10Q5UCC4 262 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 TCEAL6Q6IPX3 200 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 HTR3DQ70Z44 454 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 TRMT11Q7Z4G4 463 aaKnown RBP19.73■□□□□ 0.75
PNKP-213ENST00000599543 FBXL13Q8NEE6 735 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 TCEAL3Q969E4 200 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 NUP62CLQ9H1M0 184 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 ZDHHC4Q9NPG8 344 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 OSER1Q9NX31 292 aa19.73■□□□□ 0.75
PNKP-213ENST00000599543 A0A1W2PQH9 124 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 NEDD8-MDP1E9PL57 170 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 CETN3O15182 167 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 CHRM1P11229 460 aaPredicted RBP19.72■□□□□ 0.75
PNKP-213ENST00000599543 RARGP13631 454 aa19.72■□□□□ 0.75
PNKP-213ENST00000599543 HNRNPLP14866 589 aaKnown RBP eCLIP19.72■□□□□ 0.75
PNKP-213ENST00000599543 PSEN1P49768 467 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms