RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 LY6G5CQ5SRR4 150 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 PKN3Q6P5Z2 889 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 RHBDF2Q6PJF5 856 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 MIB1Q86YT6 1006 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 IRF2BP1Q8IU81 584 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 ARHGAP18Q8N392 663 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 ZBTB44Q8NCP5 570 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 NELL1Q92832 810 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 KREMEN1Q96MU8 473 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 THAP9Q9H5L6 903 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 UBE2TQ9NPD8 197 aaPredicted RBP23.75■■□□□ 1.39
CCDC9-204ENST00000599398 CLIC5Q9NZA1 410 aa23.75■■□□□ 1.39
CCDC9-204ENST00000599398 ATG13O75143 517 aa23.74■■□□□ 1.39
CCDC9-204ENST00000599398 ZBED1O96006 694 aa23.74■■□□□ 1.39
CCDC9-204ENST00000599398 CALCAP01258 141 aa23.74■■□□□ 1.39
CCDC9-204ENST00000599398 SETSIPP0DME0 302 aa23.74■■□□□ 1.39
CCDC9-204ENST00000599398 PLA2G4AP47712 749 aa23.74■■□□□ 1.39
CCDC9-204ENST00000599398 KLHDC10Q6PID8 442 aa23.74■■□□□ 1.39
CCDC9-204ENST00000599398 LCLAT1Q6UWP7 414 aa23.74■■□□□ 1.39
CCDC9-204ENST00000599398 GBP6Q6ZN66 633 aa23.74■■□□□ 1.39
CCDC9-204ENST00000599398 FAM114A1Q8IWE2 563 aa23.74■■□□□ 1.39
CCDC9-204ENST00000599398 CDK5RAP1Q96SZ6 601 aaKnown RBP23.74■■□□□ 1.39
CCDC9-204ENST00000599398 ULBP1Q9BZM6 244 aa23.74■■□□□ 1.39
CCDC9-204ENST00000599398 RASAL2Q9UJF2 1139 aa23.74■■□□□ 1.39
CCDC9-204ENST00000599398 WDR87Q6ZQQ6 2873 aa23.74■■□□□ 1.39
CCDC9-204ENST00000599398 EP300Q09472 2414 aaPredicted RBP23.73■■□□□ 1.39
CCDC9-204ENST00000599398 M0QYV0 167 aa23.73■■□□□ 1.39
CCDC9-204ENST00000599398 PAPSS2O95340 614 aaPredicted RBP23.73■■□□□ 1.39
CCDC9-204ENST00000599398 ERCC5P28715 1186 aaPredicted RBP23.73■■□□□ 1.39
CCDC9-204ENST00000599398 YWHAGP61981 247 aaKnown RBP eCLIP23.73■■□□□ 1.39
CCDC9-204ENST00000599398 GAD2Q05329 585 aa23.73■■□□□ 1.39
CCDC9-204ENST00000599398 ADIGQ0VDE8 80 aa23.73■■□□□ 1.39
CCDC9-204ENST00000599398 EFEMP1Q12805 493 aa23.73■■□□□ 1.39
CCDC9-204ENST00000599398 GAB4Q2WGN9 574 aa23.73■■□□□ 1.39
CCDC9-204ENST00000599398 HSP90AA4PQ58FG1 418 aa23.73■■□□□ 1.39
CCDC9-204ENST00000599398 HEATR6Q6AI08 1181 aaKnown RBP23.73■■□□□ 1.39
CCDC9-204ENST00000599398 TRIM65Q6PJ69 517 aa23.73■■□□□ 1.39
CCDC9-204ENST00000599398 HTR3DQ70Z44 454 aa23.73■■□□□ 1.39
CCDC9-204ENST00000599398 RSRC2Q7L4I2 434 aaKnown RBP23.73■■□□□ 1.39
CCDC9-204ENST00000599398 SIX6OS1Q8N1H7 587 aa23.73■■□□□ 1.39
CCDC9-204ENST00000599398 RPLP0P6Q8NHW5 317 aa23.73■■□□□ 1.39
CCDC9-204ENST00000599398 GPT2Q8TD30 523 aa23.73■■□□□ 1.39
CCDC9-204ENST00000599398 NDRG1Q92597 394 aaKnown RBP23.73■■□□□ 1.39
CCDC9-204ENST00000599398 EZH1Q92800 747 aaPredicted RBP23.73■■□□□ 1.39
CCDC9-204ENST00000599398 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.73■■□□□ 1.39
CCDC9-204ENST00000599398 SLC8A2Q9UPR5 921 aa23.73■■□□□ 1.39
CCDC9-204ENST00000599398 CHURC1-FNTBB4DL54 471 aa23.72■■□□□ 1.39
CCDC9-204ENST00000599398 K7ESF4 209 aa23.72■■□□□ 1.39
CCDC9-204ENST00000599398 SLC9A1P19634 815 aa23.72■■□□□ 1.39
CCDC9-204ENST00000599398 SLC6A11P48066 632 aa23.72■■□□□ 1.39
CCDC9-204ENST00000599398 FNTBP49356 437 aa23.72■■□□□ 1.39
CCDC9-204ENST00000599398 MFAP3P55082 362 aa23.72■■□□□ 1.39
CCDC9-204ENST00000599398 STILQ15468 1287 aa23.72■■□□□ 1.39
CCDC9-204ENST00000599398 CNGA2Q16280 664 aa23.72■■□□□ 1.39
CCDC9-204ENST00000599398 ANO4Q32M45 955 aa23.72■■□□□ 1.39
CCDC9-204ENST00000599398 BTBD8Q5XKL5 378 aa23.72■■□□□ 1.39
CCDC9-204ENST00000599398 ZNF276Q8N554 614 aa23.72■■□□□ 1.39
CCDC9-204ENST00000599398 SECISBP2LQ93073 1101 aaKnown RBP23.72■■□□□ 1.39
CCDC9-204ENST00000599398 HINFPQ9BQA5 517 aa23.72■■□□□ 1.39
CCDC9-204ENST00000599398 ZSWIM1Q9BR11 485 aa23.72■■□□□ 1.39
CCDC9-204ENST00000599398 SPHK2Q9NRA0 654 aa23.72■■□□□ 1.39
CCDC9-204ENST00000599398 LILRB5O75023 590 aa23.71■■□□□ 1.39
CCDC9-204ENST00000599398 HMBSP08397 361 aa23.71■■□□□ 1.39
CCDC9-204ENST00000599398 LCP1P13796 627 aa23.71■■□□□ 1.39
CCDC9-204ENST00000599398 RGS7P49802 495 aa23.71■■□□□ 1.39
CCDC9-204ENST00000599398 ZNF132P52740 706 aa23.71■■□□□ 1.39
CCDC9-204ENST00000599398 SEC13P55735 322 aa23.71■■□□□ 1.39
CCDC9-204ENST00000599398 DMWDQ09019 674 aa23.71■■□□□ 1.39
CCDC9-204ENST00000599398 EXOC3L4Q17RC7 722 aa23.71■■□□□ 1.39
CCDC9-204ENST00000599398 PKDCCQ504Y2 493 aa23.71■■□□□ 1.39
CCDC9-204ENST00000599398 PM20D1Q6GTS8 502 aa23.71■■□□□ 1.39
CCDC9-204ENST00000599398 GJB7Q6PEY0 223 aa23.71■■□□□ 1.39
CCDC9-204ENST00000599398 C12orf40Q86WS4 652 aa23.71■■□□□ 1.39
CCDC9-204ENST00000599398 CCDC26Q8TAB7 109 aa23.71■■□□□ 1.39
CCDC9-204ENST00000599398 PNKPQ96T60 521 aa23.71■■□□□ 1.39
CCDC9-204ENST00000599398 PRKCSHP14314 528 aaPredicted RBP23.7■■□□□ 1.38
CCDC9-204ENST00000599398 EIF2DP41214 584 aaKnown RBP23.7■■□□□ 1.38
CCDC9-204ENST00000599398 KDSRQ06136 332 aa23.7■■□□□ 1.38
CCDC9-204ENST00000599398 MAN2A1Q16706 1144 aa23.7■■□□□ 1.38
CCDC9-204ENST00000599398 ENOSF1Q7L5Y1 443 aa23.7■■□□□ 1.38
CCDC9-204ENST00000599398 TMEM25Q86YD3 366 aa23.7■■□□□ 1.38
CCDC9-204ENST00000599398 NAT16Q8N8M0 369 aa23.7■■□□□ 1.38
CCDC9-204ENST00000599398 KCTD13Q8WZ19 329 aa23.7■■□□□ 1.38
CCDC9-204ENST00000599398 MARCH2Q9P0N8 246 aa23.7■■□□□ 1.38
CCDC9-204ENST00000599398 STRIP2Q9ULQ0 834 aa23.7■■□□□ 1.38
CCDC9-204ENST00000599398 CFAP54Q96N23 3096 aa23.7■■□□□ 1.38
CCDC9-204ENST00000599398 GPR179Q6PRD1 2367 aa23.69■■□□□ 1.38
CCDC9-204ENST00000599398 KIAA1549LQ6ZVL6 1849 aa23.69■■□□□ 1.38
CCDC9-204ENST00000599398 GTPBP10A4D1E9 387 aaKnown RBP23.69■■□□□ 1.38
CCDC9-204ENST00000599398 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.69■■□□□ 1.38
CCDC9-204ENST00000599398 PIK3R2O00459 728 aa23.69■■□□□ 1.38
CCDC9-204ENST00000599398 GREM1O60565 184 aa23.69■■□□□ 1.38
CCDC9-204ENST00000599398 STC2O76061 302 aa23.69■■□□□ 1.38
CCDC9-204ENST00000599398 APODP05090 189 aa23.69■■□□□ 1.38
CCDC9-204ENST00000599398 HOXC13P31276 330 aa23.69■■□□□ 1.38
CCDC9-204ENST00000599398 USP8P40818 1118 aa23.69■■□□□ 1.38
CCDC9-204ENST00000599398 COG7P83436 770 aa23.69■■□□□ 1.38
CCDC9-204ENST00000599398 APBA1Q02410 837 aa23.69■■□□□ 1.38
CCDC9-204ENST00000599398 ARHGAP44Q17R89 818 aa23.69■■□□□ 1.38
CCDC9-204ENST00000599398 C2orf27AQ580R0 203 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms