RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SPATA18Q8TC71 538 aa17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 KCTD13Q8WZ19 329 aa17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 PGBD4Q96DM1 585 aa17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 SMOQ99835 787 aa17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 MAK16Q9BXY0 300 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 NOVA2Q9UNW9 492 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-216ENST00000598201 MDM4O15151 490 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 PQBP1O60828 265 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 FAM200BP0CF97 657 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 HPDP32754 393 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 SLC8A3P57103 927 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 PITX1P78337 314 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 MRPS5P82675 430 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 GRIK3Q13003 919 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 KYNUQ16719 465 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 EFHC1Q5JVL4 640 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 EMC10Q5UCC4 262 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 ANKRD33Q7Z3H0 272 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 FAM35AQ86V20 835 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 FAM126BQ8IXS8 530 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 DEFB106AQ8N104 65 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 ZMIZ2Q8NF64 920 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 FAM149B1Q96BN6 582 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 KCNK16Q96T55 309 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 TPX2Q9ULW0 747 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 ATP11BQ9Y2G3 1177 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 SQORQ9Y6N5 450 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 SMIM23A6NLE4 172 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 ITGB1P05556 798 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 MATKP42679 507 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 NRLP54845 237 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 TLE2Q04725 743 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 TUSC3Q13454 348 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 NOMO1Q15155 1222 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 ANKRD20A8PQ5CZ79 823 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 ERMARDQ5T6L9 678 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 C1orf228Q6PIY5 440 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 MAP7D3Q8IWC1 876 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 ZCCHC9Q8N567 271 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 CCDC185Q8N715 623 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 PCDH19Q8TAB3 1148 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 EPS8L3Q8TE67 593 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 LINC01599Q8WXQ3 324 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 TOX2Q96NM4 488 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 CAPS2Q9BXY5 557 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 RHOBTB2Q9BYZ6 727 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 LRRC4Q9HBW1 653 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 NINJ2Q9NZG7 142 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 CDH9Q9ULB4 789 aa17.76■□□□□ 0.43
SHKBP1-216ENST00000598201 TLDC2A0PJX2 215 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 B4GALT3O60512 393 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 AP1G2O75843 785 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 TTC4O95801 387 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 RBP3P10745 1247 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 TKTL1P51854 596 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 PPARDQ03181 441 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 TFDP2Q14188 446 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 PPP6R3Q5H9R7 873 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 FAM182AQ5T1J6 154 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 RNASEH2BQ5TBB1 312 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 OTUD1Q5VV17 481 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 HFE2Q6ZVN8 426 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 GPRIN1Q7Z2K8 1008 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 ZC3H18Q86VM9 953 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 PLD5Q8N7P1 536 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 FAM71DQ8N9W8 422 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 MYCBPAPQ8TBZ2 947 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 TSPYL1Q9H0U9 437 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 NRP1O14786 923 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 MCF2LO15068 1137 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 ODC1P11926 461 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 DESP17661 470 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 L1CAMP32004 1257 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 RPL22P35268 128 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 MAGOHP61326 146 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 YWHAZP63104 245 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 HOOK3Q86VS8 718 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 RSAD2Q8WXG1 361 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 P3H4Q92791 437 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 TLCD1Q96CP7 247 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 NCAPGQ9BPX3 1015 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 UBN1Q9NPG3 1134 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 RGS18Q9NS28 235 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 MTMR10Q9NXD2 777 aa17.75■□□□□ 0.43
SHKBP1-216ENST00000598201 TDRD15B5MCY1 1934 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 C9IYK1 514 aa17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 DAB1O75553 588 aa17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 CAPN15O75808 1086 aa17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 SKIP12755 728 aa17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 SLCO1A2P46721 670 aa17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 IRAK1P51617 712 aa17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 DPYSL2Q16555 572 aa17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 SLC25A52Q3SY17 297 aa17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 DCAF6Q58WW2 860 aa17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 SLC9A4Q6AI14 798 aa17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 SIX6OS1Q8N1H7 587 aa17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 TAB3Q8N5C8 712 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms