RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 YWHAGP61981 247 aaKnown RBP eCLIP23.95■■□□□ 1.42
IRF3-220ENST00000598108 ANGPT1Q15389 498 aa23.95■■□□□ 1.42
IRF3-220ENST00000598108 KLHL40Q2TBA0 621 aa23.95■■□□□ 1.42
IRF3-220ENST00000598108 C1orf210Q8IVY1 113 aa23.95■■□□□ 1.42
IRF3-220ENST00000598108 MAML2Q8IZL2 1156 aaPredicted RBP23.95■■□□□ 1.42
IRF3-220ENST00000598108 LSM14BQ9BX40 385 aaKnown RBP23.95■■□□□ 1.42
IRF3-220ENST00000598108 DNMT3LQ9UJW3 386 aa23.95■■□□□ 1.42
IRF3-220ENST00000598108 FHOD1Q9Y613 1164 aa23.95■■□□□ 1.42
IRF3-220ENST00000598108 YJEFN3A6XGL0 299 aa23.94■■□□□ 1.42
IRF3-220ENST00000598108 E7ENQ6 273 aa23.94■■□□□ 1.42
IRF3-220ENST00000598108 THAP12O43422 761 aa23.94■■□□□ 1.42
IRF3-220ENST00000598108 GNA15P30679 374 aa23.94■■□□□ 1.42
IRF3-220ENST00000598108 GALK1P51570 392 aa23.94■■□□□ 1.42
IRF3-220ENST00000598108 GAB4Q2WGN9 574 aa23.94■■□□□ 1.42
IRF3-220ENST00000598108 BBS7Q8IWZ6 715 aa23.94■■□□□ 1.42
IRF3-220ENST00000598108 ARHGAP18Q8N392 663 aa23.94■■□□□ 1.42
IRF3-220ENST00000598108 AOPEPQ8N6M6 819 aa23.94■■□□□ 1.42
IRF3-220ENST00000598108 FUCA2Q9BTY2 467 aa23.94■■□□□ 1.42
IRF3-220ENST00000598108 SPATA6Q9NWH7 488 aaPredicted RBP23.94■■□□□ 1.42
IRF3-220ENST00000598108 LIMA1Q9UHB6 759 aaKnown RBP23.94■■□□□ 1.42
IRF3-220ENST00000598108 SH3BP1Q9Y3L3 701 aa23.94■■□□□ 1.42
IRF3-220ENST00000598108 PATJQ8NI35 1801 aa23.94■■□□□ 1.42
IRF3-220ENST00000598108 MYH10P35580 1976 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 TRDMT1O14717 391 aaKnown RBP23.93■■□□□ 1.42
IRF3-220ENST00000598108 SLC9A3R1O14745 358 aaPredicted RBP23.93■■□□□ 1.42
IRF3-220ENST00000598108 NFATC1O95644 943 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 CYP17A1P05093 508 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 CLCN1P35523 988 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 KLK7P49862 253 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 COPB1P53618 953 aaKnown RBP23.93■■□□□ 1.42
IRF3-220ENST00000598108 MTAPQ13126 283 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 GAS6Q14393 721 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 DRAP1Q14919 205 aaPredicted RBP23.93■■□□□ 1.42
IRF3-220ENST00000598108 DHCR24Q15392 516 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 TMEM196Q5HYL7 178 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 FSTL4Q6MZW2 842 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 RHBDF2Q6PJF5 856 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 MIB1Q86YT6 1006 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 SIX6OS1Q8N1H7 587 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 HSFY1Q96LI6 401 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 PHOX2BQ99453 314 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 NAA15Q9BXJ9 866 aaKnown RBP23.93■■□□□ 1.42
IRF3-220ENST00000598108 CHRDQ9H2X0 955 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 CNGB3Q9NQW8 809 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 FAM86C1Q9NVL1 165 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 CYTH4Q9UIA0 394 aa23.93■■□□□ 1.42
IRF3-220ENST00000598108 KIF26AQ9ULI4 1882 aaPredicted RBP23.93■■□□□ 1.42
IRF3-220ENST00000598108 LRRC10BA6NIK2 292 aa23.92■■□□□ 1.42
IRF3-220ENST00000598108 MED7O43513 233 aa23.92■■□□□ 1.42
IRF3-220ENST00000598108 PLA2G5P39877 138 aa23.92■■□□□ 1.42
IRF3-220ENST00000598108 MAGEA9P43362 315 aa23.92■■□□□ 1.42
IRF3-220ENST00000598108 DAOAP59103 153 aa23.92■■□□□ 1.42
IRF3-220ENST00000598108 EFEMP1Q12805 493 aa23.92■■□□□ 1.42
IRF3-220ENST00000598108 NR1H3Q13133 447 aa23.92■■□□□ 1.42
IRF3-220ENST00000598108 CCINQ13939 588 aa23.92■■□□□ 1.42
IRF3-220ENST00000598108 BSPRYQ5W0U4 402 aa23.92■■□□□ 1.42
IRF3-220ENST00000598108 HTR3DQ70Z44 454 aa23.92■■□□□ 1.42
IRF3-220ENST00000598108 APTXQ7Z2E3 356 aaKnown RBP23.92■■□□□ 1.42
IRF3-220ENST00000598108 FAM71AQ8IYT1 594 aa23.92■■□□□ 1.42
IRF3-220ENST00000598108 SCML4Q8N228 414 aa23.92■■□□□ 1.42
IRF3-220ENST00000598108 CLEC4CQ8WTT0 213 aa23.92■■□□□ 1.42
IRF3-220ENST00000598108 TBC1D14Q9P2M4 693 aa23.92■■□□□ 1.42
IRF3-220ENST00000598108 ATP1A3P13637 1013 aa23.91■■□□□ 1.42
IRF3-220ENST00000598108 UCHL3P15374 230 aa23.91■■□□□ 1.42
IRF3-220ENST00000598108 RPL34P49207 117 aaKnown RBP23.91■■□□□ 1.42
IRF3-220ENST00000598108 AMPD2Q01433 879 aa23.91■■□□□ 1.42
IRF3-220ENST00000598108 RAPGEF1Q13905 1077 aa23.91■■□□□ 1.42
IRF3-220ENST00000598108 Q6ZS52 159 aa23.91■■□□□ 1.42
IRF3-220ENST00000598108 TADA2BQ86TJ2 420 aa23.91■■□□□ 1.42
IRF3-220ENST00000598108 SLC47A2Q86VL8 602 aa23.91■■□□□ 1.42
IRF3-220ENST00000598108 DHX40Q8IX18 779 aaKnown RBP23.91■■□□□ 1.42
IRF3-220ENST00000598108 WDTC1Q8N5D0 677 aa23.91■■□□□ 1.42
IRF3-220ENST00000598108 EDEM1Q92611 657 aa23.91■■□□□ 1.42
IRF3-220ENST00000598108 ATOH1Q92858 354 aaPredicted RBP23.91■■□□□ 1.42
IRF3-220ENST00000598108 FAM122AQ96E09 287 aa23.91■■□□□ 1.42
IRF3-220ENST00000598108 P2RY13Q9BPV8 354 aa23.91■■□□□ 1.42
IRF3-220ENST00000598108 GANQ9H2C0 597 aa23.91■■□□□ 1.42
IRF3-220ENST00000598108 RASAL2Q9UJF2 1139 aa23.91■■□□□ 1.42
IRF3-220ENST00000598108 STC2O76061 302 aa23.9■■□□□ 1.42
IRF3-220ENST00000598108 EGFP01133 1207 aa23.9■■□□□ 1.42
IRF3-220ENST00000598108 OPRD1P41143 372 aa23.9■■□□□ 1.42
IRF3-220ENST00000598108 GRSF1Q12849 480 aaKnown RBP eCLIP23.9■■□□□ 1.42
IRF3-220ENST00000598108 DGKKQ5KSL6 1271 aa23.9■■□□□ 1.42
IRF3-220ENST00000598108 LY6G5CQ5SRR4 150 aa23.9■■□□□ 1.42
IRF3-220ENST00000598108 BTBD8Q5XKL5 378 aa23.9■■□□□ 1.42
IRF3-220ENST00000598108 RSRC2Q7L4I2 434 aaKnown RBP23.9■■□□□ 1.42
IRF3-220ENST00000598108 EZH1Q92800 747 aaPredicted RBP23.9■■□□□ 1.42
IRF3-220ENST00000598108 CDK5RAP1Q96SZ6 601 aaKnown RBP23.9■■□□□ 1.42
IRF3-220ENST00000598108 BPIFA3Q9BQP9 254 aa23.9■■□□□ 1.42
IRF3-220ENST00000598108 SLC4A5Q9BY07 1137 aa23.9■■□□□ 1.42
IRF3-220ENST00000598108 MIS12Q9H081 205 aa23.9■■□□□ 1.42
IRF3-220ENST00000598108 NAT10Q9H0A0 1025 aaKnown RBP23.9■■□□□ 1.42
IRF3-220ENST00000598108 PLCB1Q9NQ66 1216 aa23.9■■□□□ 1.42
IRF3-220ENST00000598108 MARCH2Q9P0N8 246 aa23.9■■□□□ 1.42
IRF3-220ENST00000598108 SIK3Q9Y2K2 1263 aa23.9■■□□□ 1.42
IRF3-220ENST00000598108 SYCE3A1L190 88 aa23.89■■□□□ 1.41
IRF3-220ENST00000598108 LGALS16A8MUM7 142 aa23.89■■□□□ 1.41
IRF3-220ENST00000598108 EPHB6O15197 1021 aa23.89■■□□□ 1.41
IRF3-220ENST00000598108 KLKB1P03952 638 aa23.89■■□□□ 1.41
IRF3-220ENST00000598108 TPM2P07951 284 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms