RNA–Protein interactions for RNA: ENST00000597967.5

VAV1-205, Transcript of vav guanine nucleotide exchange factor 1, humanhuman

TSL 4

Gene VAV1, Length 563 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV1-205ENST00000597967 SPHK2Q9NRA0 654 aa13.22□□□□□ -0.29
VAV1-205ENST00000597967 TMEM74BQ9NUR3 256 aa13.22□□□□□ -0.29
VAV1-205ENST00000597967 BCCIPQ9P287 314 aaKnown RBP eCLIP13.22□□□□□ -0.29
VAV1-205ENST00000597967 PILRBQ9UKJ0 227 aa13.22□□□□□ -0.29
VAV1-205ENST00000597967 RAXQ9Y2V3 346 aa13.22□□□□□ -0.29
VAV1-205ENST00000597967 SH3BP1Q9Y3L3 701 aa13.22□□□□□ -0.29
VAV1-205ENST00000597967 STARD13Q9Y3M8 1113 aa13.22□□□□□ -0.29
VAV1-205ENST00000597967 GON4LQ3T8J9 2241 aa13.22□□□□□ -0.29
VAV1-205ENST00000597967 PLXNB3Q9ULL4 1909 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 TCRBV21S2A2A0A5A6 115 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 TBC1D3BA6NDS4 549 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 GOLGA6L22H0YM25 854 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 CLIC2O15247 247 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 AP5Z1O43299 807 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 STX6O43752 255 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 TULP3O75386 442 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 CYP2J2P51589 502 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 SLC5A3P53794 718 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 CLDN10P78369 228 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 KDSRQ06136 332 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 LYSMD4Q5XG99 296 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 PAQR9Q6ZVX9 377 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 FAM35AQ86V20 835 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 TMEFF1Q8IYR6 380 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 ZNF513Q8N8E2 541 aaPredicted RBP13.21□□□□□ -0.29
VAV1-205ENST00000597967 TMEM174Q8WUU8 243 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 HMGB4Q8WW32 186 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 SMARCD1Q96GM5 515 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 CRELD1Q96HD1 420 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 KCNK16Q96T55 309 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 CCDC86Q9H6F5 360 aaKnown RBP13.21□□□□□ -0.29
VAV1-205ENST00000597967 DEC1Q9P2X7 70 aa13.21□□□□□ -0.29
VAV1-205ENST00000597967 NXF1Q9UBU9 619 aaKnown RBP13.21□□□□□ -0.29
VAV1-205ENST00000597967 MYH10P35580 1976 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 PVALEFA0A1B0GWK0 134 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 H0Y626 953 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 CUTAO60888 179 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 PHACTR2O75167 634 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 TRIM16O95361 564 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 YEATS4O95619 227 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 PTGER3P43115 390 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 IFRD2Q12894 506 aaPredicted RBP13.2□□□□□ -0.3
VAV1-205ENST00000597967 KNOP1Q1ED39 458 aaKnown RBP13.2□□□□□ -0.3
VAV1-205ENST00000597967 DUOXA1Q1HG43 343 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 ZNF667Q5HYK9 610 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 HTR3DQ70Z44 454 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 BBS7Q8IWZ6 715 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 FRMD1Q8N878 549 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 TERB1Q8NA31 727 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 OR2I1PQ8NGU4 316 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 SCAMP5Q8TAC9 235 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 GOLGA5Q8TBA6 731 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 DHX58Q96C10 678 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 ZNF396Q96N95 335 aaPredicted RBP13.2□□□□□ -0.3
VAV1-205ENST00000597967 GTPBP2Q9BX10 602 aaKnown RBP13.2□□□□□ -0.3
VAV1-205ENST00000597967 FBXO44Q9H4M3 255 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 CCSER2Q9H7U1 834 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 CSNK1G1Q9HCP0 422 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 CACNA2D2Q9NY47 1150 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 CHORDC1Q9UHD1 332 aaPredicted RBP13.2□□□□□ -0.3
VAV1-205ENST00000597967 SLC6A14Q9UN76 642 aa13.2□□□□□ -0.3
VAV1-205ENST00000597967 SCAMP3O14828 347 aaKnown RBP13.19□□□□□ -0.3
VAV1-205ENST00000597967 EXOC3O60645 756 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 ZNF217O75362 1048 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 CFIP05156 583 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 SERPINF2P08697 491 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 GABRG2P18507 467 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 NTSR1P30989 418 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 RDXP35241 583 aaKnown RBP13.19□□□□□ -0.3
VAV1-205ENST00000597967 HNRNPDQ14103 355 aaKnown RBP13.19□□□□□ -0.3
VAV1-205ENST00000597967 ZNF699Q32M78 642 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 SHC4Q6S5L8 630 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 SLC9A9Q8IVB4 645 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 NELFCDQ8IXH7 590 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 FUKQ8N0W3 1084 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 CRYBG2Q8N1P7 616 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 PGBD3Q8N328 593 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 PNPLA1Q8N8W4 532 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 PARD3BQ8TEW8 1205 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 CAMK1GQ96NX5 476 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 MED10Q9BTT4 135 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 SMYD3Q9H7B4 428 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 CAPN10Q9HC96 672 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 CD248Q9HCU0 757 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 MARK1Q9P0L2 795 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 GMIPQ9P107 970 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 TFIP11Q9UBB9 837 aaKnown RBP13.19□□□□□ -0.3
VAV1-205ENST00000597967 PCDH15Q96QU1 1955 aa13.19□□□□□ -0.3
VAV1-205ENST00000597967 MAST4O15021 2626 aa13.18□□□□□ -0.3
VAV1-205ENST00000597967 ZBTB24O43167 697 aaPredicted RBP13.18□□□□□ -0.3
VAV1-205ENST00000597967 CACNG3O60359 315 aa13.18□□□□□ -0.3
VAV1-205ENST00000597967 GREM1O60565 184 aa13.18□□□□□ -0.3
VAV1-205ENST00000597967 AP1G2O75843 785 aa13.18□□□□□ -0.3
VAV1-205ENST00000597967 C4BPAP04003 597 aaKnown RBP13.18□□□□□ -0.3
VAV1-205ENST00000597967 RPN1P04843 607 aaKnown RBP13.18□□□□□ -0.3
VAV1-205ENST00000597967 PDIA4P13667 645 aaKnown RBP13.18□□□□□ -0.3
VAV1-205ENST00000597967 P4HA1P13674 534 aa13.18□□□□□ -0.3
VAV1-205ENST00000597967 HOXB2P14652 356 aa13.18□□□□□ -0.3
VAV1-205ENST00000597967 ITPKAP23677 461 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms