RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 DEC1Q9P2X7 70 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 STARD13Q9Y3M8 1113 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 PLXND1Q9Y4D7 1925 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 GCN1Q92616 2671 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 A8MXQ7 604 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 ARHGAP33O14559 1287 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 POLR2DO15514 142 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 OPHN1O60890 802 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 ZDHHC11BP0C7U3 371 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 PFKFB1P16118 471 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 DPP6P42658 865 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 ATXN3P54252 364 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 MYL6P60660 151 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 C10orf76Q5T2E6 689 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 HECTD3Q5T447 861 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 EGFLAMQ63HQ2 1017 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 SLC36A4Q6YBV0 504 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 RAB44Q7Z6P3 723 aaPredicted RBP17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 CCDC65Q8IXS2 484 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 TERB1Q8NA31 727 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 OVCA2Q8WZ82 227 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 CCDC127Q96BQ5 260 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 DHX58Q96C10 678 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 CGRRF1Q99675 332 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 TRIM9Q9C026 710 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 CD93Q9NPY3 652 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 DNAAF2Q9NVR5 837 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 BPTFQ12830 3046 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 PCDH15Q96QU1 1955 aa17.44■□□□□ 0.38
SHKBP1-215ENST00000597649 APC2O95996 2303 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 SH3BP5O60239 455 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 RTN3O95197 1032 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 HOXB2P14652 356 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 TNNI1P19237 187 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 NDUFV2P19404 249 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 NTSR1P30989 418 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 SYKP43405 635 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 CDH8P55286 799 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 CYP24A1Q07973 514 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 PSMD6Q15008 389 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 ACAP1Q15027 740 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 SNRNP35Q16560 246 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 ANO4Q32M45 955 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 BTBD8Q5XKL5 378 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 EPM2AIP1Q7L775 607 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 CEP57L1Q8IYX8 460 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 TRIML1Q8N9V2 468 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 ZNF507Q8TCN5 953 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 ELMO3Q96BJ8 720 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 DUSP9Q99956 384 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 SLC6A17Q9H1V8 727 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 CUEDC2Q9H467 287 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 KIAA1586Q9HCI6 787 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 AGPAT3Q9NRZ7 376 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 GMIPQ9P107 970 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 NXF1Q9UBU9 619 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 CYP8B1Q9UNU6 501 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 SH3BP1Q9Y3L3 701 aa17.43■□□□□ 0.38
SHKBP1-215ENST00000597649 ACACAQ13085 2346 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 KNL1Q8NG31 2342 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 FAM92AA1XBS5 289 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 H0Y626 953 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 CLIC2O15247 247 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 GJB3O75712 270 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 TRIM16O95361 564 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 TBX18O95935 607 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 IRF1P10914 325 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 SLC5A3P53794 718 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 UBE2HP62256 183 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 TNNC1P63316 161 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 TRMT11Q7Z4G4 463 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 PDZD8Q8NEN9 1154 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 IPO4Q8TEX9 1081 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 P2RY11Q96G91 374 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 ZNF419Q96HQ0 510 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 HSPA12BQ96MM6 686 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 SMYD3Q9H7B4 428 aa17.42■□□□□ 0.38
SHKBP1-215ENST00000597649 PRRT4C9JH25 899 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 GADD45BO75293 160 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 STAU1O95793 577 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 CYP2J2P51589 502 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 NDUFA8P51970 172 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 TOGARAM2Q6ZUX3 1019 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 HTR3DQ70Z44 454 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 FAM35AQ86V20 835 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 PROSER1Q86XN7 944 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 ZMIZ2Q8NF64 920 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 PLEKHO2Q8TD55 490 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 CCDC34Q96HJ3 373 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 GABRG3Q99928 467 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 LRRC27Q9C0I9 530 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 USP25Q9UHP3 1055 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 HPSEQ9Y251 543 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 RAD54BQ9Y620 910 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 CEP192Q8TEP8 1941 aa17.41■□□□□ 0.38
SHKBP1-215ENST00000597649 WASH3PC4AMC7 463 aa17.4■□□□□ 0.38
SHKBP1-215ENST00000597649 BEST1O76090 585 aa17.4■□□□□ 0.38
SHKBP1-215ENST00000597649 CISD3P0C7P0 127 aa17.4■□□□□ 0.38
SHKBP1-215ENST00000597649 MAOBP27338 520 aa17.4■□□□□ 0.38
SHKBP1-215ENST00000597649 TUBP50607 506 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms