RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 ATP11AP98196 1134 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 TAF10Q12962 218 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 TAF12Q16514 161 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 SLC25A52Q3SY17 297 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 PAPD7Q5XG87 772 aaKnown RBP15.32■□□□□ 0.04
VRK3-212ENST00000596814 BTBD8Q5XKL5 378 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 BEND5Q7L4P6 421 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 SCD5Q86SK9 330 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 MON1AQ86VX9 555 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 UBL4BQ8N7F7 174 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 EDEM1Q92611 657 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 SLITRK1Q96PX8 696 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 ABCC13Q9NSE7 274 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 SNX12Q9UMY4 172 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 NAALADL1Q9UQQ1 740 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 CCDC66A2RUB6 948 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 PSTPIP1O43586 416 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 LRG1P02750 347 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 CTNNA2P26232 953 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 CTNNA1P35221 906 aaKnown RBP15.31■□□□□ 0.04
VRK3-212ENST00000596814 SYPL2Q5VXT5 272 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 ITIH5Q86UX2 942 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 FAM172AQ8WUF8 416 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 PSMB7Q99436 277 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 NMUR1Q9HB89 426 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 TLR8Q9NR97 1041 aaKnown RBP15.31■□□□□ 0.04
VRK3-212ENST00000596814 RRN3Q9NYV6 651 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 DDX3YO15523 660 aaKnown RBP15.31■□□□□ 0.04
VRK3-212ENST00000596814 URI1O94763 535 aaPredicted RBP15.31■□□□□ 0.04
VRK3-212ENST00000596814 HMGA1P17096 107 aaKnown RBP15.31■□□□□ 0.04
VRK3-212ENST00000596814 TFE3P19532 575 aaPredicted RBP15.31■□□□□ 0.04
VRK3-212ENST00000596814 PCK1P35558 622 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 MARCKSL1P49006 195 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 PSEN1P49768 467 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 TAS2R40P59535 323 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 AMPD2Q01433 879 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 SH3PXD2AQ5TCZ1 1133 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 STRADAQ7RTN6 431 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 RHOT1Q8IXI2 618 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 ARFGAP1Q8N6T3 406 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 PDZD8Q8NEN9 1154 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 OVCA2Q8WZ82 227 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 KRT35Q92764 455 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 PSMG2Q969U7 264 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 TRMT2BQ96GJ1 504 aaKnown RBP15.31■□□□□ 0.04
VRK3-212ENST00000596814 TBCBQ99426 244 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 NPY6RQ99463 290 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 NCAPGQ9BPX3 1015 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 PLEKHA4Q9H4M7 779 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 MAN1C1Q9NR34 630 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 ASB3Q9Y575 518 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 PCDHA3Q9Y5H8 950 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 SAR1BQ9Y6B6 198 aa15.31■□□□□ 0.04
VRK3-212ENST00000596814 A0A1W2PPC1 479 aa15.3■□□□□ 0.04
VRK3-212ENST00000596814 KCNK3O14649 394 aa15.3■□□□□ 0.04
VRK3-212ENST00000596814 TCP1P17987 556 aaKnown RBP15.3■□□□□ 0.04
VRK3-212ENST00000596814 MIPP30301 263 aa15.3■□□□□ 0.04
VRK3-212ENST00000596814 GJC1P36383 396 aa15.3■□□□□ 0.04
VRK3-212ENST00000596814 PGFP49763 221 aa15.3■□□□□ 0.04
VRK3-212ENST00000596814 SLC25A11Q02978 314 aaKnown RBP15.3■□□□□ 0.04
VRK3-212ENST00000596814 HADHQ16836 314 aaKnown RBP15.3■□□□□ 0.04
VRK3-212ENST00000596814 PPM1LQ5SGD2 360 aa15.3■□□□□ 0.04
VRK3-212ENST00000596814 OTUD1Q5VV17 481 aaPredicted RBP15.3■□□□□ 0.04
VRK3-212ENST00000596814 RTL10Q7L3V2 364 aa15.3■□□□□ 0.04
VRK3-212ENST00000596814 ADGRD2Q7Z7M1 963 aa15.3■□□□□ 0.04
VRK3-212ENST00000596814 ELMOD1Q8N336 334 aa15.3■□□□□ 0.04
VRK3-212ENST00000596814 SLC22A17Q8WUG5 538 aa15.3■□□□□ 0.04
VRK3-212ENST00000596814 CENPIQ92674 756 aaPredicted RBP15.3■□□□□ 0.04
VRK3-212ENST00000596814 NT5C3BQ969T7 300 aa15.3■□□□□ 0.04
VRK3-212ENST00000596814 MYRFLQ96LU7 910 aa15.3■□□□□ 0.04
VRK3-212ENST00000596814 OSBPL9Q96SU4 736 aa15.3■□□□□ 0.04
VRK3-212ENST00000596814 UXTQ9UBK9 157 aaPredicted RBP15.3■□□□□ 0.04
VRK3-212ENST00000596814 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.3■□□□□ 0.04
VRK3-212ENST00000596814 M0QYT0 321 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 PER2O15055 1255 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 TCF4P15884 667 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 EPCAMP16422 314 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 PRLRP16471 622 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 RDXP35241 583 aaKnown RBP15.29■□□□□ 0.04
VRK3-212ENST00000596814 HDAC4P56524 1084 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 PITX1P78337 314 aaPredicted RBP15.29■□□□□ 0.04
VRK3-212ENST00000596814 LRRC38Q5VT99 294 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 RSRC2Q7L4I2 434 aaKnown RBP15.29■□□□□ 0.04
VRK3-212ENST00000596814 DNAJB7Q7Z6W7 309 aaPredicted RBP15.29■□□□□ 0.04
VRK3-212ENST00000596814 RBM23Q86U06 439 aaKnown RBP15.29■□□□□ 0.04
VRK3-212ENST00000596814 DQX1Q8TE96 717 aaKnown RBP15.29■□□□□ 0.04
VRK3-212ENST00000596814 RNF139Q8WU17 664 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 MRPL38Q96DV4 380 aaKnown RBP15.29■□□□□ 0.04
VRK3-212ENST00000596814 ZNF512Q96ME7 567 aaPredicted RBP15.29■□□□□ 0.04
VRK3-212ENST00000596814 ADAM33Q9BZ11 813 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 FAM204AQ9H8W3 233 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 OSER1Q9NX31 292 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 CLIC5Q9NZA1 410 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 USP18Q9UMW8 372 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 MYO9BQ13459 2157 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 RFXAPO00287 272 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 PRPSAP2O60256 369 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 ZDHHC11BP0C7U3 371 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 RALAP11233 206 aa15.29■□□□□ 0.04
VRK3-212ENST00000596814 CXCR5P32302 372 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms