RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 ID4P47928 161 aa13.74□□□□□ -0.21
LIG1-212ENST00000596549 PAK1Q13153 545 aa13.74□□□□□ -0.21
LIG1-212ENST00000596549 CCDC40Q4G0X9 1142 aa13.74□□□□□ -0.21
LIG1-212ENST00000596549 KLHDC10Q6PID8 442 aa13.74□□□□□ -0.21
LIG1-212ENST00000596549 HTR3DQ70Z44 454 aa13.74□□□□□ -0.21
LIG1-212ENST00000596549 TRIM59Q8IWR1 403 aa13.74□□□□□ -0.21
LIG1-212ENST00000596549 FAM160A2Q8N612 972 aaPredicted RBP13.74□□□□□ -0.21
LIG1-212ENST00000596549 GAB3Q8WWW8 586 aa13.74□□□□□ -0.21
LIG1-212ENST00000596549 ACDQ96AP0 544 aa13.74□□□□□ -0.21
LIG1-212ENST00000596549 P2RY11Q96G91 374 aa13.74□□□□□ -0.21
LIG1-212ENST00000596549 ZDHHC4Q9NPG8 344 aa13.74□□□□□ -0.21
LIG1-212ENST00000596549 SPHK2Q9NRA0 654 aa13.74□□□□□ -0.21
LIG1-212ENST00000596549 GMEB2Q9UKD1 530 aa13.74□□□□□ -0.21
LIG1-212ENST00000596549 WDR87Q6ZQQ6 2873 aa13.74□□□□□ -0.21
LIG1-212ENST00000596549 THADAQ6YHU6 1953 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 O00370 1275 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 TRIM24O15164 1050 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 PMM2O15305 246 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 KAT7O95251 611 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 ATP5C1P36542 298 aaKnown RBP13.73□□□□□ -0.21
LIG1-212ENST00000596549 KIR2DL1P43626 348 aaPredicted RBP13.73□□□□□ -0.21
LIG1-212ENST00000596549 MARSP56192 900 aaKnown RBP13.73□□□□□ -0.21
LIG1-212ENST00000596549 GAD2Q05329 585 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 PDE4CQ08493 712 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 SPEM2Q0P670 501 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 C2orf27AQ580R0 203 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 Q6ZNB5 142 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.73□□□□□ -0.21
LIG1-212ENST00000596549 TMEM25Q86YD3 366 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 ARHGEF19Q8IW93 802 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 CAMKK1Q8N5S9 505 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 ANKRD52Q8NB46 1076 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 MED15Q96RN5 788 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 PNKPQ96T60 521 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 ZSWIM1Q9BR11 485 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 ARHGEF4Q9NR80 690 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 NAGPAQ9UK23 515 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 RAB23Q9ULC3 237 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 MMP17Q9ULZ9 603 aa13.73□□□□□ -0.21
LIG1-212ENST00000596549 MYO18AQ92614 2054 aaKnown RBP13.72□□□□□ -0.21
LIG1-212ENST00000596549 PTPRZ1P23471 2315 aaPredicted RBP13.72□□□□□ -0.21
LIG1-212ENST00000596549 BICDL2A1A5D9 508 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 XPO1O14980 1071 aaKnown RBP13.72□□□□□ -0.21
LIG1-212ENST00000596549 TULP3O75386 442 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 RPP40O75818 363 aaKnown RBP13.72□□□□□ -0.21
LIG1-212ENST00000596549 STC2O76061 302 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 RETP07949 1114 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 TBXAS1P24557 533 aaPredicted RBP13.72□□□□□ -0.21
LIG1-212ENST00000596549 PSEN1P49768 467 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 BCAT1P54687 386 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 UBE2HP62256 183 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 PKDCCQ504Y2 493 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 SGO2Q562F6 1265 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 C10orf120Q5SQS8 335 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 TMEM92Q6UXU6 159 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 ZNF276Q8N554 614 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 CCDC33Q8N5R6 958 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 ALLCQ8N6M5 410 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 NAT16Q8N8M0 369 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 TRIML1Q8N9V2 468 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 IL17RCQ8NAC3 791 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 TFAP2BQ92481 460 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 NDRG1Q92597 394 aaKnown RBP13.72□□□□□ -0.21
LIG1-212ENST00000596549 SECISBP2LQ93073 1101 aaKnown RBP13.72□□□□□ -0.21
LIG1-212ENST00000596549 NT5C1BQ96P26 610 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 ULBP1Q9BZM6 244 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 DNAI2Q9GZS0 605 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 CLIC5Q9NZA1 410 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 CHMP5Q9NZZ3 219 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 MARK1Q9P0L2 795 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 RASAL2Q9UJF2 1139 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 HCN2Q9UL51 889 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 USP18Q9UMW8 372 aa13.72□□□□□ -0.21
LIG1-212ENST00000596549 A0A0A0MRY4 1105 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.71□□□□□ -0.21
LIG1-212ENST00000596549 NEDD8-MDP1E9PL57 170 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 RNF225M0QZC1 329 aaPredicted RBP13.71□□□□□ -0.21
LIG1-212ENST00000596549 SGK1O00141 431 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 AXIN1O15169 862 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 P4HA2O15460 535 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 CACNG3O60359 315 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 APBB3O95704 486 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 CALCAP01258 141 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 KLKB1P03952 638 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 APODP05090 189 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 VDRP11473 427 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 CD19P15391 556 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 TIE1P35590 1138 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 PLA2G4AP47712 749 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 TKTL1P51854 596 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 YWHAEP62258 255 aaKnown RBP13.71□□□□□ -0.21
LIG1-212ENST00000596549 ADIGQ0VDE8 80 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 BST2Q10589 180 aaKnown RBP13.71□□□□□ -0.21
LIG1-212ENST00000596549 KCNH2Q12809 1159 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 CRY1Q16526 586 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 CAMK4Q16566 473 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 EMC10Q5UCC4 262 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 TMEM270Q6UE05 265 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 CEP68Q76N32 757 aa13.71□□□□□ -0.21
LIG1-212ENST00000596549 KBTBD6Q86V97 674 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms