RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PLA2G4AP47712 749 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 SATB1Q01826 763 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 STILQ15468 1287 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 GOLGA7BQ2TAP0 167 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 TSSK4Q6SA08 328 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 RRAGAQ7L523 313 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 BHLHA9Q7RTU4 235 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 TADA2BQ86TJ2 420 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 SUMF1Q8NBK3 374 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 GPT2Q8TD30 523 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 SLC35F5Q8WV83 523 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 KCTD13Q8WZ19 329 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 WBP2Q969T9 261 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 IPO9Q96P70 1041 aaKnown RBP13.73□□□□□ -0.21
USE1-207ENST00000596136 CDK5RAP1Q96SZ6 601 aaKnown RBP13.73□□□□□ -0.21
USE1-207ENST00000596136 C2orf42Q9NWW7 574 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 HESX1Q9UBX0 185 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 PCDHB4Q9Y5E5 795 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 ATG13O75143 517 aa13.72□□□□□ -0.21
USE1-207ENST00000596136 ZBED1O96006 694 aa13.72□□□□□ -0.21
USE1-207ENST00000596136 LMNAP02545 664 aaKnown RBP13.72□□□□□ -0.21
USE1-207ENST00000596136 CD19P15391 556 aa13.72□□□□□ -0.21
USE1-207ENST00000596136 TKTL1P51854 596 aa13.72□□□□□ -0.21
USE1-207ENST00000596136 PKN3Q6P5Z2 889 aa13.72□□□□□ -0.21
USE1-207ENST00000596136 TRIM65Q6PJ69 517 aa13.72□□□□□ -0.21
USE1-207ENST00000596136 ENOSF1Q7L5Y1 443 aa13.72□□□□□ -0.21
USE1-207ENST00000596136 ARHGAP18Q8N392 663 aa13.72□□□□□ -0.21
USE1-207ENST00000596136 RBBP8NLQ8NC74 664 aaPredicted RBP13.72□□□□□ -0.21
USE1-207ENST00000596136 FAM81BQ96LP2 452 aa13.72□□□□□ -0.21
USE1-207ENST00000596136 NACA2Q9H009 215 aa13.72□□□□□ -0.21
USE1-207ENST00000596136 DACH1Q9UI36 760 aa13.72□□□□□ -0.21
USE1-207ENST00000596136 DNMT3LQ9UJW3 386 aa13.72□□□□□ -0.21
USE1-207ENST00000596136 NAGPAQ9UK23 515 aa13.72□□□□□ -0.21
USE1-207ENST00000596136 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.72□□□□□ -0.21
USE1-207ENST00000596136 SH3BP1Q9Y3L3 701 aa13.72□□□□□ -0.21
USE1-207ENST00000596136 KIAA1549LQ6ZVL6 1849 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 HOXC11O43248 304 aaPredicted RBP13.71□□□□□ -0.21
USE1-207ENST00000596136 GABBR2O75899 941 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 ADH1CP00326 375 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 RALAP11233 206 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 PRKCSHP14314 528 aaPredicted RBP13.71□□□□□ -0.21
USE1-207ENST00000596136 RPL34P49207 117 aaKnown RBP13.71□□□□□ -0.21
USE1-207ENST00000596136 MEA1Q16626 185 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 C10orf120Q5SQS8 335 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 LY6G5CQ5SRR4 150 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 GBP6Q6ZN66 633 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 Q6ZNB5 142 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 BBS7Q8IWZ6 715 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 ETFBKMTQ8IXQ9 262 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 CCDC26Q8TAB7 109 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 UBA3Q8TBC4 463 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 ATRIPQ8WXE1 791 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 ULBP1Q9BZM6 244 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 EPC1Q9H2F5 836 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 UBE2TQ9NPD8 197 aaPredicted RBP13.71□□□□□ -0.21
USE1-207ENST00000596136 SPHK2Q9NRA0 654 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 NUDT5Q9UKK9 219 aa13.71□□□□□ -0.21
USE1-207ENST00000596136 MYO18AQ92614 2054 aaKnown RBP13.7□□□□□ -0.22
USE1-207ENST00000596136 CCDC163A0A0D9SF12 145 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 K7EQS6 105 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 SCAMP3O14828 347 aaKnown RBP13.7□□□□□ -0.22
USE1-207ENST00000596136 MDM4O15151 490 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 RNF40O75150 1001 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 CHRM1P11229 460 aaPredicted RBP13.7□□□□□ -0.22
USE1-207ENST00000596136 ADH5P11766 374 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 SLC9A1P19634 815 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 PON1P27169 355 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 SLC6A11P48066 632 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 YWHAGP61981 247 aaKnown RBP eCLIP13.7□□□□□ -0.22
USE1-207ENST00000596136 COG7P83436 770 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 GAD2Q05329 585 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 GOLGA8FQ08AF8 430 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 GOLGA8DPQ0D2H9 430 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 MAN2A1Q16706 1144 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 EXOC3L4Q17RC7 722 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 PMF1Q6P1K2 205 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 FAM114A1Q8IWE2 563 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 PHTF2Q8N3S3 785 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 HSFY1Q96LI6 401 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 CRACR2AQ9BSW2 395 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 LRRC4Q9HBW1 653 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 CNGB3Q9NQW8 809 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 MARK1Q9P0L2 795 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 APEX2Q9UBZ4 518 aa13.7□□□□□ -0.22
USE1-207ENST00000596136 STC2O76061 302 aa13.69□□□□□ -0.22
USE1-207ENST00000596136 BRD2P25440 801 aaKnown RBP13.69□□□□□ -0.22
USE1-207ENST00000596136 CNR2P34972 360 aa13.69□□□□□ -0.22
USE1-207ENST00000596136 GPD2P43304 727 aa13.69□□□□□ -0.22
USE1-207ENST00000596136 MTIF2P46199 727 aaKnown RBP13.69□□□□□ -0.22
USE1-207ENST00000596136 MFAP3P55082 362 aa13.69□□□□□ -0.22
USE1-207ENST00000596136 DMWDQ09019 674 aa13.69□□□□□ -0.22
USE1-207ENST00000596136 ADIGQ0VDE8 80 aa13.69□□□□□ -0.22
USE1-207ENST00000596136 MESP2Q0VG99 397 aa13.69□□□□□ -0.22
USE1-207ENST00000596136 TPD52L1Q16890 204 aaPredicted RBP13.69□□□□□ -0.22
USE1-207ENST00000596136 MIIPQ5JXC2 388 aa13.69□□□□□ -0.22
USE1-207ENST00000596136 DPY19L2P1Q6NXN4 242 aa13.69□□□□□ -0.22
USE1-207ENST00000596136 SYT13Q7L8C5 426 aa13.69□□□□□ -0.22
USE1-207ENST00000596136 C12orf40Q86WS4 652 aa13.69□□□□□ -0.22
USE1-207ENST00000596136 TMEM25Q86YD3 366 aa13.69□□□□□ -0.22
USE1-207ENST00000596136 CAMKK1Q8N5S9 505 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms