RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 SHISA7A6NL88 538 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 PRR33A8MZF0 331 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 MMEP08473 750 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 RALAP11233 206 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 TCF3P15923 654 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 CHRNB2P17787 502 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 KRT9P35527 623 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 ATP5C1P36542 298 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 STAT1P42224 750 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 PSEN1P49768 467 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 VCPP55072 806 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 UBASH3AP57075 661 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 BPIFB4P59827 614 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 ZNF445P59923 1031 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 ARID5AQ03989 594 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 EFEMP1Q12805 493 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 MEA1Q16626 185 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 BSPRYQ5W0U4 402 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 CC2D1AQ6P1N0 951 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 CACNA2D4Q7Z3S7 1137 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 MIB1Q86YT6 1006 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 SCUBE3Q8IX30 993 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 CSGALNACT1Q8TDX6 532 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 PIWIL1Q96J94 861 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 HSFY1Q96LI6 401 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 CPXM1Q96SM3 734 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 KLF16Q9BXK1 252 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 FOXQ1Q9C009 403 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 MFSD1Q9H3U5 465 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 THG1LQ9NWX6 298 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 DUS2Q9NX74 493 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 CLIC5Q9NZA1 410 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 RASAL2Q9UJF2 1139 aa14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 NOCTQ9UK39 431 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-207ENST00000595631 ZNF318Q5VUA4 2279 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 A0A1W2PQC6 194 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 PAPSS1O43252 624 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 HMBSP08397 361 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 IFNAR2P48551 515 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 EML3Q32P44 896 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 BTBD8Q5XKL5 378 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 RSRC2Q7L4I2 434 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 BMP8AQ7Z5Y6 402 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 SCML4Q8N228 414 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 ARHGAP18Q8N392 663 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 FBXL6Q8N531 539 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 OSCP1Q8WVF1 389 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 BAP1Q92560 729 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 LHX5Q9H2C1 402 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 PDCL3Q9H2J4 239 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 DNMT3LQ9UJW3 386 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 DAAM1Q9Y4D1 1078 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 PIAS3Q9Y6X2 628 aa14.45□□□□□ -0.1
SHKBP1-207ENST00000595631 STK25O00506 426 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 PI15O43692 258 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 ERBB2P04626 1255 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 PBX1P40424 430 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 ACADSBP45954 432 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 KPNA1P52294 538 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 STARD6P59095 220 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 PLCB2Q00722 1185 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 FMO1Q01740 532 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 RUNX3Q13761 415 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 TAF5Q15542 800 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 PTPN20Q4JDL3 420 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 C2CD6Q53TS8 623 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 SMYD5Q6GMV2 418 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 TMEM110Q86TL2 294 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 BBS7Q8IWZ6 715 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 ZNF276Q8N554 614 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 TMEM105Q8N8V8 129 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 STK32AQ8WU08 396 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 IRGQQ8WZA9 623 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 CHFRQ96EP1 664 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 PPP1R13BQ96KQ4 1090 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 XPO4Q9C0E2 1151 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 TTYH3Q9C0H2 523 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 TRPV5Q9NQA5 729 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 SFMBT1Q9UHJ3 866 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 SH3BP1Q9Y3L3 701 aa14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 MTF2Q9Y483 593 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-207ENST00000595631 LRRC53A6NM62 1247 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 MSI1O43347 362 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 GREM1O60565 184 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 FBXO21O94952 628 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 LTFP02788 710 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 FYNP06241 537 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 CTHP32929 405 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 CDH5P33151 784 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 NOMO3P69849 1222 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 CDR2Q01850 454 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 PRKCQQ04759 706 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 PDGFRLQ15198 375 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 ITPRIPL2Q3MIP1 535 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 NAA35Q5VZE5 725 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 E4F1Q66K89 784 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 NAIF1Q69YI7 327 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 KLHDC10Q6PID8 442 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 TXNDC11Q6PKC3 985 aa14.43□□□□□ -0.1
SHKBP1-207ENST00000595631 FAM183BPQ6ZVS7 135 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms