RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ETF1P62495 437 aaKnown RBP13.64□□□□□ -0.23
SCAF1-202ENST00000595242 MTF1Q14872 753 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 SLC39A12Q504Y0 691 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 SEZ6Q53EL9 994 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 TRIM65Q6PJ69 517 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 TOGARAM2Q6ZUX3 1019 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 STXBP4Q6ZWJ1 553 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 NELFCDQ8IXH7 590 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 DAW1Q8N136 415 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 KIF18AQ8NI77 898 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 CPLX3Q8WVH0 158 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 KIFAP3Q92845 792 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 MRPL44Q9H9J2 332 aaKnown RBP13.64□□□□□ -0.23
SCAF1-202ENST00000595242 DNAAF2Q9NVR5 837 aaKnown RBP13.64□□□□□ -0.23
SCAF1-202ENST00000595242 DKK4Q9UBT3 224 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 WNT6Q9Y6F9 365 aa13.64□□□□□ -0.23
SCAF1-202ENST00000595242 CCDC169A6NNP5 214 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 DYNC1I1O14576 645 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 RIOK3O14730 519 aaKnown RBP13.63□□□□□ -0.23
SCAF1-202ENST00000595242 LRPAP1P30533 357 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 IFNAR2P48551 515 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 NR1H3Q13133 447 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 DMP1Q13316 513 aaPredicted RBP13.63□□□□□ -0.23
SCAF1-202ENST00000595242 SLC14A1Q13336 389 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 ZNF268Q14587 947 aaPredicted RBP13.63□□□□□ -0.23
SCAF1-202ENST00000595242 EML3Q32P44 896 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 MAP7D1Q3KQU3 841 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 CCDC40Q4G0X9 1142 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 MPZL3Q6UWV2 235 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 ZNF720Q7Z2F6 126 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 RABEPKQ7Z6M1 372 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 ZNF605Q86T29 641 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 MON1AQ86VX9 555 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 CREBRFQ8IUR6 639 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 DEFB119Q8N690 84 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 OR10T2Q8NGX3 314 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 ST6GALNAC4Q9H4F1 302 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 ZHX3Q9H4I2 956 aa13.63□□□□□ -0.23
SCAF1-202ENST00000595242 POLMQ9NP87 494 aaPredicted RBP13.63□□□□□ -0.23
SCAF1-202ENST00000595242 BCCIPQ9P287 314 aaKnown RBP eCLIP13.63□□□□□ -0.23
SCAF1-202ENST00000595242 APOBEC2Q9Y235 224 aaKnown RBP13.63□□□□□ -0.23
SCAF1-202ENST00000595242 A0A087WV48 116 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 TGFB1I1O43294 461 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 CTIFO43310 598 aaKnown RBP13.62□□□□□ -0.23
SCAF1-202ENST00000595242 HIP1RO75146 1068 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 PRPF6O94906 941 aaKnown RBP13.62□□□□□ -0.23
SCAF1-202ENST00000595242 GCNT3O95395 438 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 HMGA1P17096 107 aaKnown RBP13.62□□□□□ -0.23
SCAF1-202ENST00000595242 TRIM21P19474 475 aaKnown RBP13.62□□□□□ -0.23
SCAF1-202ENST00000595242 NR2F2P24468 414 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 RPL13P26373 211 aaKnown RBP13.62□□□□□ -0.23
SCAF1-202ENST00000595242 PEX3P56589 373 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 MRPS21P82921 87 aaKnown RBP13.62□□□□□ -0.23
SCAF1-202ENST00000595242 ADAM9Q13443 819 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 BYSLQ13895 437 aaKnown RBP13.62□□□□□ -0.23
SCAF1-202ENST00000595242 WDR59Q6PJI9 974 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 ZNF662Q6ZS27 426 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 TAS1R3Q7RTX0 852 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 SLCO6A1Q86UG4 719 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 NAXDQ8IW45 347 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 EFCAB13Q8IY85 973 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 PGBD3Q8N328 593 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 MYCT1Q8N699 235 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 ALLCQ8N6M5 410 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 MRPS31Q92665 395 aaKnown RBP13.62□□□□□ -0.23
SCAF1-202ENST00000595242 EEF2KMTQ96G04 330 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 ZBTB45Q96K62 511 aaPredicted RBP13.62□□□□□ -0.23
SCAF1-202ENST00000595242 TMEM134Q9H6X4 195 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 L2HGDHQ9H9P8 463 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 METTL14Q9HCE5 456 aaKnown RBP13.62□□□□□ -0.23
SCAF1-202ENST00000595242 RAI2Q9Y5P3 530 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 CABIN1Q9Y6J0 2220 aa13.62□□□□□ -0.23
SCAF1-202ENST00000595242 PTPRQQ9UMZ3 2332 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 PES1O00541 588 aaKnown RBP13.61□□□□□ -0.23
SCAF1-202ENST00000595242 NR3C1P04150 777 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 SYPP08247 313 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 ODC1P11926 461 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 OPRD1P41143 372 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 NPTX2P47972 431 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 RPL6Q02878 288 aaKnown RBP13.61□□□□□ -0.23
SCAF1-202ENST00000595242 CYP4F3Q08477 520 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 KCNMA1Q12791 1236 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 ZBTB6Q15916 424 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 ZNF77Q15935 545 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 SLC9A9Q8IVB4 645 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 SCUBE3Q8IX30 993 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 C12orf56Q8IXR9 622 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 TXNDC5Q8NBS9 432 aaKnown RBP13.61□□□□□ -0.23
SCAF1-202ENST00000595242 ZNF397Q8NF99 534 aaPredicted RBP13.61□□□□□ -0.23
SCAF1-202ENST00000595242 GOLGA5Q8TBA6 731 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 HMGB4Q8WW32 186 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 SENP8Q96LD8 212 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 CYP2S1Q96SQ9 504 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 ZCWPW1Q9H0M4 648 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 LINC00597Q9H2U6 94 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 LARSQ9P2J5 1176 aaKnown RBP13.61□□□□□ -0.23
SCAF1-202ENST00000595242 MAGED2Q9UNF1 606 aaPredicted RBP13.61□□□□□ -0.23
SCAF1-202ENST00000595242 PCDHB13Q9Y5F0 798 aa13.61□□□□□ -0.23
SCAF1-202ENST00000595242 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.61□□□□□ -0.23
SCAF1-202ENST00000595242 KNL1Q8NG31 2342 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms