RNA–Protein interactions for RNA: ENST00000593818.5

IRF3-206, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-206ENST00000593818 CPA6Q8N4T0 437 aa13.19□□□□□ -0.3
IRF3-206ENST00000593818 LRRC52Q8N7C0 313 aa13.19□□□□□ -0.3
IRF3-206ENST00000593818 FBXL13Q8NEE6 735 aa13.19□□□□□ -0.3
IRF3-206ENST00000593818 OR10T2Q8NGX3 314 aa13.19□□□□□ -0.3
IRF3-206ENST00000593818 CCDC26Q8TAB7 109 aa13.19□□□□□ -0.3
IRF3-206ENST00000593818 ADAM32Q8TC27 787 aa13.19□□□□□ -0.3
IRF3-206ENST00000593818 USP33Q8TEY7 942 aa13.19□□□□□ -0.3
IRF3-206ENST00000593818 SEMA4DQ92854 862 aa13.19□□□□□ -0.3
IRF3-206ENST00000593818 HPDLQ96IR7 371 aa13.19□□□□□ -0.3
IRF3-206ENST00000593818 ZNF560Q96MR9 790 aa13.19□□□□□ -0.3
IRF3-206ENST00000593818 PI4K2AQ9BTU6 479 aa13.19□□□□□ -0.3
IRF3-206ENST00000593818 XYLT2Q9H1B5 865 aa13.19□□□□□ -0.3
IRF3-206ENST00000593818 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.19□□□□□ -0.33e-7■■■■■ 53.4
IRF3-206ENST00000593818 TMEM74BQ9NUR3 256 aa13.19□□□□□ -0.3
IRF3-206ENST00000593818 LIMA1Q9UHB6 759 aaKnown RBP13.19□□□□□ -0.3
IRF3-206ENST00000593818 MYO18AQ92614 2054 aaKnown RBP13.19□□□□□ -0.3
IRF3-206ENST00000593818 ZNF462Q96JM2 2506 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 KPNA7A9QM74 516 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 GOLGA6L19H0YKK7 550 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 CLSTN1O94985 981 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 F11P03951 625 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 CHRM1P11229 460 aaPredicted RBP13.18□□□□□ -0.3
IRF3-206ENST00000593818 HMGA1P17096 107 aaKnown RBP13.18□□□□□ -0.3
IRF3-206ENST00000593818 PTGER3P43115 390 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 COPB1P53618 953 aaKnown RBP13.18□□□□□ -0.3
IRF3-206ENST00000593818 USP4Q13107 963 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 ZNF699Q32M78 642 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 VWA3BQ502W6 1294 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 SPOPLQ6IQ16 392 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 LPCAT2Q7L5N7 544 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 ADAMTS14Q8WXS8 1223 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 SENP8Q96LD8 212 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 VPS16Q9H269 839 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 NDST4Q9H3R1 872 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 PILRBQ9UKJ0 227 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 MMP17Q9ULZ9 603 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 COQ4Q9Y3A0 265 aa13.18□□□□□ -0.3
IRF3-206ENST00000593818 PES1O00541 588 aaKnown RBP13.17□□□□□ -0.3
IRF3-206ENST00000593818 ASS1P00966 412 aaKnown RBP13.17□□□□□ -0.3
IRF3-206ENST00000593818 CDK11BP21127 795 aaKnown RBP13.17□□□□□ -0.3
IRF3-206ENST00000593818 PNPLA4P41247 253 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 MYO1EQ12965 1108 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 MTF1Q14872 753 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 ZNF77Q15935 545 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 CRY1Q16526 586 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 EML3Q32P44 896 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 CC2D1AQ6P1N0 951 aaPredicted RBP13.17□□□□□ -0.3
IRF3-206ENST00000593818 DSTYKQ6XUX3 929 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 CCNI2Q6ZMN8 369 aaPredicted RBP13.17□□□□□ -0.3
IRF3-206ENST00000593818 MON1AQ86VX9 555 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 MAB21L3Q8N8X9 362 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 OSCP1Q8WVF1 389 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 ATP2A3Q93084 1043 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 SEPT5Q99719 369 aaPredicted RBP13.17□□□□□ -0.3
IRF3-206ENST00000593818 ZCWPW1Q9H0M4 648 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 RBSNQ9H1K0 784 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 CCDC86Q9H6F5 360 aaKnown RBP13.17□□□□□ -0.3
IRF3-206ENST00000593818 CAPN10Q9HC96 672 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 RAB20Q9NX57 234 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 DKK4Q9UBT3 224 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 MBD1Q9UIS9 605 aaPredicted RBP13.17□□□□□ -0.3
IRF3-206ENST00000593818 R3HCC1Q9Y3T6 440 aaKnown RBP13.17□□□□□ -0.3
IRF3-206ENST00000593818 SNX9Q9Y5X1 595 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 SHROOM3Q8TF72 1996 aa13.17□□□□□ -0.3
IRF3-206ENST00000593818 K7EQS6 105 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 CYB561D2O14569 222 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 PMM2O15305 246 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 STAU1O95793 577 aaKnown RBP13.16□□□□□ -0.3
IRF3-206ENST00000593818 CYP11A1P05108 521 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 ODC1P11926 461 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 CD59P13987 128 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 HNRNPLP14866 589 aaKnown RBP eCLIP13.16□□□□□ -0.3
IRF3-206ENST00000593818 PAX3P23760 479 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 ATICP31939 592 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 TPM4P67936 248 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 NOP14P78316 857 aaKnown RBP13.16□□□□□ -0.3
IRF3-206ENST00000593818 LRMPQ12912 555 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 SGSM1Q2NKQ1 1148 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 WDR72Q3MJ13 1102 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 MGAT5BQ3V5L5 792 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 TXNDC8Q6A555 127 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 SCARA5Q6ZMJ2 495 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 HDDC3Q8N4P3 179 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 ANKRD20A12PQ8NF67 263 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 LMO3Q8TAP4 145 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 C2orf15Q8WU43 125 aaKnown RBP13.16□□□□□ -0.3
IRF3-206ENST00000593818 SPACA7Q96KW9 195 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 CRACR2AQ9BSW2 395 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 INTS2Q9H0H0 1204 aaKnown RBP13.16□□□□□ -0.3
IRF3-206ENST00000593818 VRTNQ9H8Y1 702 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 APOBEC3GQ9HC16 384 aaKnown RBP13.16□□□□□ -0.3
IRF3-206ENST00000593818 GDAP2Q9NXN4 497 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 GCNT4Q9P109 453 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 NXF1Q9UBU9 619 aaKnown RBP13.16□□□□□ -0.3
IRF3-206ENST00000593818 L1RE1Q9UN81 338 aa13.16□□□□□ -0.3
IRF3-206ENST00000593818 LRRC10BA6NIK2 292 aa13.15□□□□□ -0.3
IRF3-206ENST00000593818 LGALS16A8MUM7 142 aa13.15□□□□□ -0.3
IRF3-206ENST00000593818 P4HA2O15460 535 aa13.15□□□□□ -0.3
IRF3-206ENST00000593818 OPHN1O60890 802 aa13.15□□□□□ -0.3
IRF3-206ENST00000593818 TADA3O75528 432 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms