RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 TERB1Q8NA31 727 aa11.29□□□□□ -0.6
USE1-203ENST00000593597 WHAMMQ8TF30 809 aa11.29□□□□□ -0.6
USE1-203ENST00000593597 HMGB4Q8WW32 186 aa11.29□□□□□ -0.6
USE1-203ENST00000593597 PIGKQ92643 395 aa11.29□□□□□ -0.6
USE1-203ENST00000593597 SNX21Q969T3 373 aa11.29□□□□□ -0.6
USE1-203ENST00000593597 ERLEC1Q96DZ1 483 aa11.29□□□□□ -0.6
USE1-203ENST00000593597 PAGE5Q96GU1 130 aa11.29□□□□□ -0.6
USE1-203ENST00000593597 MED10Q9BTT4 135 aa11.29□□□□□ -0.6
USE1-203ENST00000593597 KLF16Q9BXK1 252 aaPredicted RBP11.29□□□□□ -0.6
USE1-203ENST00000593597 SPHK2Q9NRA0 654 aa11.29□□□□□ -0.6
USE1-203ENST00000593597 CGNQ9P2M7 1197 aaKnown RBP11.29□□□□□ -0.6
USE1-203ENST00000593597 TP53BP1Q12888 1972 aaPredicted RBP11.28□□□□□ -0.6
USE1-203ENST00000593597 FAM208BQ5VWN6 2430 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 PRRT4C9JH25 899 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 TLR5O60602 858 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 NR3C1P04150 777 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 SLFN14P0C7P3 912 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 TNFRSF4P43489 277 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 ME1P48163 572 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 MAP3K7CLP57077 242 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 GAD2Q05329 585 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 ZNF252P-AS1Q0IIN9 211 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 INCA1Q0VD86 236 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 KIAA1211LQ6NV74 962 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 CLEC20AQ6ZU45 233 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 ZNF513Q8N8E2 541 aaPredicted RBP11.28□□□□□ -0.6
USE1-203ENST00000593597 OTUB2Q96DC9 234 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 SLC6A17Q9H1V8 727 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 CALCOCO1Q9P1Z2 691 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 TBC1D14Q9P2M4 693 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 EVLQ9UI08 416 aaPredicted RBP11.28□□□□□ -0.6
USE1-203ENST00000593597 NUDT5Q9UKK9 219 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 RCOR1Q9UKL0 485 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 HPSEQ9Y251 543 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 LAMA5O15230 3695 aa11.28□□□□□ -0.6
USE1-203ENST00000593597 A0A1B0GVL5 298 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.27□□□□□ -0.61
USE1-203ENST00000593597 KHNYNO15037 678 aaKnown RBP11.27□□□□□ -0.61
USE1-203ENST00000593597 CACNG3O60359 315 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 HLA-DRAP01903 254 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 CISD3P0C7P0 127 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 TRIM49P0CI25 452 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 TRIM49CP0CI26 452 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 PFKFB1P16118 471 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 ENGP17813 658 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 ITPKAP23677 461 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 ADORA2BP29275 332 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 PPP3CAQ08209 521 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 HSF5Q4G112 596 aaPredicted RBP11.27□□□□□ -0.61
USE1-203ENST00000593597 TRIM61Q5EBN2 209 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 EOGTQ5NDL2 527 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 C10orf76Q5T2E6 689 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 Q6ZNB5 142 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 HTR3DQ70Z44 454 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 SCD5Q86SK9 330 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 C11orf74Q86VG3 221 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 SLC41A1Q8IVJ1 513 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 DEFB119Q8N690 84 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 CCDC26Q8TAB7 109 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 TMC2Q8TDI7 906 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 JAKMIP2Q96AA8 810 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 TNIP3Q96KP6 325 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 TMEM9BQ9NQ34 198 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 CYLDQ9NQC7 956 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 COMMD8Q9NX08 183 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 FAM13BQ9NYF5 915 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 PILRBQ9UKJ0 227 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 ZDHHC9Q9Y397 364 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 SH3BP1Q9Y3L3 701 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 ATP8B3O60423 1300 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 TMEM131Q92545 1883 aa11.27□□□□□ -0.61
USE1-203ENST00000593597 NUMA1Q14980 2115 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 NYNRINQ9P2P1 1898 aaKnown RBP11.26□□□□□ -0.61
USE1-203ENST00000593597 IGHV1OR15-9A0A0B4J2B8 117 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 A0A1W2PQH9 124 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 TBC1D3BA6NDS4 549 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 NEDD8-MDP1E9PL57 170 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 PDXKO00764 312 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 ALDH1A2O94788 518 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 NDUFV2P19404 249 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 CSRP1P21291 193 aaKnown RBP11.26□□□□□ -0.61
USE1-203ENST00000593597 AP3M2P53677 418 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 FOXC1Q12948 553 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 ANO4Q32M45 955 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 LPCAT2Q7L5N7 544 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 PIP4P1Q86T03 277 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 DEFB124Q8NES8 71 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 OR2I1PQ8NGU4 316 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 GOLGA5Q8TBA6 731 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 TAS1R2Q8TE23 839 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 HNRNPABQ99729 332 aaKnown RBP11.26□□□□□ -0.61
USE1-203ENST00000593597 POLMQ9NP87 494 aaPredicted RBP11.26□□□□□ -0.61
USE1-203ENST00000593597 EXOC1Q9NV70 894 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 DNAJC17Q9NVM6 304 aaKnown RBP11.26□□□□□ -0.61
USE1-203ENST00000593597 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.26□□□□□ -0.61
USE1-203ENST00000593597 MARK1Q9P0L2 795 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 BCCIPQ9P287 314 aaKnown RBP eCLIP11.26□□□□□ -0.61
USE1-203ENST00000593597 DEC1Q9P2X7 70 aa11.26□□□□□ -0.61
USE1-203ENST00000593597 CIZ1Q9ULV3 898 aaPredicted RBP11.26□□□□□ -0.61
USE1-203ENST00000593597 SCML2Q9UQR0 700 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms