RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 PGFP49763 221 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 MXI1P50539 228 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 SF3A2Q15428 464 aaKnown RBP17.03■□□□□ 0.32
CIRBP-241ENST00000593048 CRY1Q16526 586 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 ZCWPW2Q504Y3 356 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 PPP1R26Q5T8A7 1209 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-241ENST00000593048 TCERG1LQ5VWI1 586 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 GPRIN1Q7Z2K8 1008 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 TTC39CQ8N584 583 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 ALLCQ8N6M5 410 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 TXNDC5Q8NBS9 432 aaKnown RBP17.03■□□□□ 0.32
CIRBP-241ENST00000593048 FBXL13Q8NEE6 735 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 DUSP15Q9H1R2 295 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-241ENST00000593048 PNPLA8Q9NP80 782 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 SPHK2Q9NRA0 654 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 RAB20Q9NX57 234 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 DEC1Q9P2X7 70 aa17.03■□□□□ 0.32
CIRBP-241ENST00000593048 HOOK1Q9UJC3 728 aaKnown RBP17.03■□□□□ 0.32
CIRBP-241ENST00000593048 A0A1W2PQH9 124 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 ANTXRLA6NF34 631 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 MPLP40238 635 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 PRCPP42785 496 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 CREB5Q02930 508 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 HSF5Q4G112 596 aaPredicted RBP17.02■□□□□ 0.32
CIRBP-241ENST00000593048 DCAF17Q5H9S7 520 aaPredicted RBP17.02■□□□□ 0.32
CIRBP-241ENST00000593048 EOGTQ5NDL2 527 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 ZNF658Q5TYW1 1059 aaPredicted RBP17.02■□□□□ 0.32
CIRBP-241ENST00000593048 EMC10Q5UCC4 262 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 IL31Q6EBC2 164 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 TADA2BQ86TJ2 420 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 C11orf74Q86VG3 221 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 TMEM25Q86YD3 366 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 SFTPA1Q8IWL2 248 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 FMR1NBQ8N0W7 255 aaPredicted RBP17.02■□□□□ 0.32
CIRBP-241ENST00000593048 WHAMMQ8TF30 809 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 SEMA4DQ92854 862 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 WBP2Q969T9 261 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 CNOT6LQ96LI5 555 aaKnown RBP17.02■□□□□ 0.32
CIRBP-241ENST00000593048 CNTNAP3BQ96NU0 1288 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 KLF16Q9BXK1 252 aaPredicted RBP17.02■□□□□ 0.32
CIRBP-241ENST00000593048 DUSP16Q9BY84 665 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 CNTNAP3Q9BZ76 1288 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 POLMQ9NP87 494 aaPredicted RBP17.02■□□□□ 0.32
CIRBP-241ENST00000593048 BCCIPQ9P287 314 aaKnown RBP eCLIP17.02■□□□□ 0.32
CIRBP-241ENST00000593048 NAGPAQ9UK23 515 aa17.02■□□□□ 0.32
CIRBP-241ENST00000593048 A0A0A0MRY4 1105 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 HHLA1C9JL84 531 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 HOXC11O43248 304 aaPredicted RBP17.01■□□□□ 0.31
CIRBP-241ENST00000593048 TULP3O75386 442 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 RALAP11233 206 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 RARGP13631 454 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 KCNA4P22459 653 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 ZNF445P59923 1031 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 MESP2Q0VG99 397 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 C10orf120Q5SQS8 335 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 HTR3DQ70Z44 454 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 PGBD3Q8N328 593 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 IL17RCQ8NAC3 791 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 SMARCE1Q969G3 411 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 TMEM176AQ96HP8 235 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 FAXDC2Q96IV6 333 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 GSDMAQ96QA5 445 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 XPO6Q96QU8 1125 aaKnown RBP17.01■□□□□ 0.31
CIRBP-241ENST00000593048 DUSP9Q99956 384 aaKnown RBP17.01■□□□□ 0.31
CIRBP-241ENST00000593048 SMOC1Q9H4F8 434 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 CYLDQ9NQC7 956 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 VPS45Q9NRW7 570 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 CISHQ9NSE2 258 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 DNMT3LQ9UJW3 386 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 NUDT5Q9UKK9 219 aa17.01■□□□□ 0.31
CIRBP-241ENST00000593048 NEDD8-MDP1E9PL57 170 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 SGK1O00141 431 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 PLA2G4AP47712 749 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 PSEN1P49768 467 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 KIF11P52732 1056 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 SLC8A3P57103 927 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 FKBP3Q00688 224 aaKnown RBP17■□□□□ 0.31
CIRBP-241ENST00000593048 TMEM92Q6UXU6 159 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 TPGS1Q6ZTW0 290 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 TRMT11Q7Z4G4 463 aaKnown RBP17■□□□□ 0.31
CIRBP-241ENST00000593048 RASSF3Q86WH2 238 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 MDGA1Q8NFP4 955 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 DDX1Q92499 740 aaKnown RBP17■□□□□ 0.31
CIRBP-241ENST00000593048 BBS2Q9BXC9 721 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 GTPBP4Q9BZE4 634 aaKnown RBP17■□□□□ 0.31
CIRBP-241ENST00000593048 NMUR1Q9HB89 426 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 ZDHHC4Q9NPG8 344 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17■□□□□ 0.31
CIRBP-241ENST00000593048 OSER1Q9NX31 292 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 WDR35Q9P2L0 1181 aa17■□□□□ 0.31
CIRBP-241ENST00000593048 MDM4O15151 490 aa16.99■□□□□ 0.31
CIRBP-241ENST00000593048 SLC16A3O15427 465 aaKnown RBP16.99■□□□□ 0.31
CIRBP-241ENST00000593048 MAP3K13O43283 966 aa16.99■□□□□ 0.31
CIRBP-241ENST00000593048 CAVIN2O95810 425 aa16.99■□□□□ 0.31
CIRBP-241ENST00000593048 KIR2DL1P43626 348 aaPredicted RBP16.99■□□□□ 0.31
CIRBP-241ENST00000593048 STIM1Q13586 685 aa16.99■□□□□ 0.31
CIRBP-241ENST00000593048 PPM1JQ5JR12 505 aa16.99■□□□□ 0.31
CIRBP-241ENST00000593048 PLA2G2CQ5R387 149 aa16.99■□□□□ 0.31
CIRBP-241ENST00000593048 C10orf76Q5T2E6 689 aa16.99■□□□□ 0.31
CIRBP-241ENST00000593048 ANKRD40Q6AI12 368 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms