RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ACAD10Q6JQN1 1059 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 ALKBH5Q6P6C2 394 aaKnown RBP10.13□□□□□ -0.79
DDX39A-220ENST00000593008 OLFML1Q6UWY5 402 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 MTSS1LQ765P7 747 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 SCD5Q86SK9 330 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 XYLT1Q86Y38 959 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 SUGP1Q8IWZ8 645 aaKnown RBP10.13□□□□□ -0.79
DDX39A-220ENST00000593008 SIX5Q8N196 739 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 EMC1Q8N766 993 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 JOSD2Q8TAC2 188 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 EDEM1Q92611 657 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 PSMG2Q969U7 264 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 NXPE3Q969Y0 559 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 ZNF653Q96CK0 615 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 CCDC42Q96M95 316 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 PLA2G2FQ9BZM2 168 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 THAP2Q9H0W7 228 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 MFSD1Q9H3U5 465 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 AVENQ9NQS1 362 aaPredicted RBP10.13□□□□□ -0.79
DDX39A-220ENST00000593008 METTL5Q9NRN9 209 aaKnown RBP10.13□□□□□ -0.79
DDX39A-220ENST00000593008 GDE1Q9NZC3 331 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 CA14Q9ULX7 337 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 HCN4Q9Y3Q4 1203 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.13□□□□□ -0.79
DDX39A-220ENST00000593008 MYO10Q9HD67 2058 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 TCRBV5S1A1TA0A578 114 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 STK25O00506 426 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 FTLP02792 175 aaPredicted RBP10.12□□□□□ -0.79
DDX39A-220ENST00000593008 CCDC172P0C7W6 258 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 TFE3P19532 575 aaPredicted RBP10.12□□□□□ -0.79
DDX39A-220ENST00000593008 GABRR2P28476 465 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 PLA2G5P39877 138 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 VIPR2P41587 438 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 EPHA5P54756 1037 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 GALCP54803 685 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 DAOAP59103 153 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 RPL10AP62906 217 aaKnown RBP10.12□□□□□ -0.79
DDX39A-220ENST00000593008 OGDHQ02218 1023 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 SMARCB1Q12824 385 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 GRM2Q14416 872 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 TSR1Q2NL82 804 aaKnown RBP10.12□□□□□ -0.79
DDX39A-220ENST00000593008 IER5LQ5T953 404 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 OTUD1Q5VV17 481 aaPredicted RBP10.12□□□□□ -0.79
DDX39A-220ENST00000593008 DAB2IPQ5VWQ8 1189 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 SMYD5Q6GMV2 418 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 OR6B2Q6IFH4 312 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 TRIM72Q6ZMU5 477 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 DENND5BQ6ZUT9 1274 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 GAREM2Q75VX8 874 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 BMP8AQ7Z5Y6 402 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 TMEM110Q86TL2 294 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 ITIH5Q86UX2 942 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 ERICH1Q86X53 443 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 PHF13Q86YI8 300 aaPredicted RBP10.12□□□□□ -0.79
DDX39A-220ENST00000593008 TMTC1Q8IUR5 882 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 MCOLN2Q8IZK6 566 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 NUP93Q8N1F7 819 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 SIX6OS1Q8N1H7 587 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 FBXL6Q8N531 539 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 FLCNQ8NFG4 579 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 KCTD13Q8WZ19 329 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 FBXO32Q969P5 355 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 FAM122AQ96E09 287 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 BTBD6Q96KE9 485 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 SPATA17Q96L03 361 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 SLC22A12Q96S37 553 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 LACRTQ9GZZ8 138 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 SMG9Q9H0W8 520 aaKnown RBP10.12□□□□□ -0.79
DDX39A-220ENST00000593008 ATXN3LQ9H3M9 355 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 SYNCQ9H7C4 482 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 LRRC4Q9HBW1 653 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 ADAM22Q9P0K1 906 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 CALCOCO1Q9P1Z2 691 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 MYO1AQ9UBC5 1043 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 HSFX1Q9UBD0 423 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 SALL4Q9UJQ4 1053 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 EPN1Q9Y6I3 576 aaPredicted RBP10.12□□□□□ -0.79
DDX39A-220ENST00000593008 USP3Q9Y6I4 520 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 OBSL1O75147 1896 aa10.12□□□□□ -0.79
DDX39A-220ENST00000593008 ZDBF2Q9HCK1 2354 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 DOCK8Q8NF50 2099 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 NCANO14594 1321 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 KRBA1A5PL33 1030 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 C2orf78A6NCI8 922 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 USP27XA6NNY8 438 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 EIF3CLB5ME19 914 aaKnown RBP10.11□□□□□ -0.79
DDX39A-220ENST00000593008 SCAMP3O14828 347 aaKnown RBP10.11□□□□□ -0.79
DDX39A-220ENST00000593008 LCA5LO95447 670 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 TBX18O95935 607 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 ZBED1O96006 694 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 FYNP06241 537 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 FCARP24071 287 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 YWHAQP27348 245 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 FLT3P36888 993 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 RPL7AP62424 266 aaKnown RBP10.11□□□□□ -0.79
DDX39A-220ENST00000593008 ZNF252P-AS1Q0IIN9 211 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 FAM102AQ5T9C2 384 aaPredicted RBP10.11□□□□□ -0.79
DDX39A-220ENST00000593008 LEMD2Q8NC56 503 aa10.11□□□□□ -0.79
DDX39A-220ENST00000593008 ZSCAN18Q8TBC5 510 aaPredicted RBP10.11□□□□□ -0.79
DDX39A-220ENST00000593008 ADAM32Q8TC27 787 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms