RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 SOX9P48436 509 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 YWHAGP61981 247 aaKnown RBP eCLIP16.08■□□□□ 0.16
TRIM47-206ENST00000592942 RUNX3Q13761 415 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 EML3Q32P44 896 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 BSPRYQ5W0U4 402 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 ASTLQ6HA08 431 aaPredicted RBP16.08■□□□□ 0.16
TRIM47-206ENST00000592942 SCUBE3Q8IX30 993 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 ADGRG2Q8IZP9 1017 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 KIAA1958Q8N8K9 716 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 FLCNQ8NFG4 579 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 TTC8Q8TAM2 541 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 FOXQ1Q9C009 403 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 EBF3Q9H4W6 596 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 NLRC4Q9NPP4 1024 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 DUS2Q9NX74 493 aaKnown RBP16.08■□□□□ 0.16
TRIM47-206ENST00000592942 CFAP97Q9P2B7 532 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 TJP2Q9UDY2 1190 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 WNT6Q9Y6F9 365 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 MYO16Q9Y6X6 1858 aa16.08■□□□□ 0.16
TRIM47-206ENST00000592942 HELZP42694 1942 aaKnown RBP16.07■□□□□ 0.16
TRIM47-206ENST00000592942 FYNP06241 537 aa16.07■□□□□ 0.16
TRIM47-206ENST00000592942 GLULP15104 373 aa16.07■□□□□ 0.16
TRIM47-206ENST00000592942 AOC1P19801 751 aa16.07■□□□□ 0.16
TRIM47-206ENST00000592942 BPIFB4P59827 614 aa16.07■□□□□ 0.16
TRIM47-206ENST00000592942 TXNDC11Q6PKC3 985 aa16.07■□□□□ 0.16
TRIM47-206ENST00000592942 TPRG1Q6ZUI0 275 aa16.07■□□□□ 0.16
TRIM47-206ENST00000592942 NOP9Q86U38 636 aaKnown RBP16.07■□□□□ 0.16
TRIM47-206ENST00000592942 SHDQ96IW2 340 aa16.07■□□□□ 0.16
TRIM47-206ENST00000592942 MFSD1Q9H3U5 465 aa16.07■□□□□ 0.16
TRIM47-206ENST00000592942 DLGAP2Q9P1A6 1054 aa16.07■□□□□ 0.16
TRIM47-206ENST00000592942 DAAM1Q9Y4D1 1078 aa16.07■□□□□ 0.16
TRIM47-206ENST00000592942 PIAS3Q9Y6X2 628 aa16.07■□□□□ 0.16
TRIM47-206ENST00000592942 ZDBF2Q9HCK1 2354 aa16.07■□□□□ 0.16
TRIM47-206ENST00000592942 ZNF318Q5VUA4 2279 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 E2F8A0AVK6 867 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 SCAMP3O14828 347 aaKnown RBP16.06■□□□□ 0.16
TRIM47-206ENST00000592942 PAPSS1O43252 624 aaPredicted RBP16.06■□□□□ 0.16
TRIM47-206ENST00000592942 RALAP11233 206 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 CHRNB2P17787 502 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 TARSP26639 723 aaKnown RBP16.06■□□□□ 0.16
TRIM47-206ENST00000592942 CDH5P33151 784 aaPredicted RBP16.06■□□□□ 0.16
TRIM47-206ENST00000592942 SOX5P35711 763 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 FANCCQ00597 558 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 PDGFRLQ15198 375 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 GAB4Q2WGN9 574 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 ITPRIPL2Q3MIP1 535 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 C10orf120Q5SQS8 335 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 CC2D1AQ6P1N0 951 aaPredicted RBP16.06■□□□□ 0.16
TRIM47-206ENST00000592942 LRSAM1Q6UWE0 723 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 HTR3DQ70Z44 454 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 PASD1Q8IV76 773 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 ARHGAP18Q8N392 663 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 TTC16Q8NEE8 873 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 NEK11Q8NG66 645 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 CSGALNACT1Q8TDX6 532 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 IRGQQ8WZA9 623 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 C8orf33Q9H7E9 229 aaPredicted RBP16.06■□□□□ 0.16
TRIM47-206ENST00000592942 ECT2Q9H8V3 914 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 LTB4R2Q9NPC1 389 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 DNMT3LQ9UJW3 386 aa16.06■□□□□ 0.16
TRIM47-206ENST00000592942 FAM170BA6NMN3 283 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 E5RJQ4 531 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 SPECC1L-ADORA2AF8WAN1 911 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 GFPT2O94808 682 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 KLKB1P03952 638 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 CTHP32929 405 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 KRT9P35527 623 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 ACADSBP45954 432 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 PDCLQ13371 301 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 ZNF852Q6ZMS4 543 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 DDX42Q86XP3 938 aaKnown RBP eCLIP16.05■□□□□ 0.16
TRIM47-206ENST00000592942 SUGP1Q8IWZ8 645 aaKnown RBP16.05■□□□□ 0.16
TRIM47-206ENST00000592942 CCDC105Q8IYK2 499 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 SIX6OS1Q8N1H7 587 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 PJA1Q8NG27 643 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 EPS8L1Q8TE68 723 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 FAM3CQ92520 227 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 BAP1Q92560 729 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 EDEM1Q92611 657 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 PCMTD1Q96MG8 357 aaPredicted RBP16.05■□□□□ 0.16
TRIM47-206ENST00000592942 CPXM1Q96SM3 734 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 OSBPL6Q9BZF3 934 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 MIS12Q9H081 205 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 FBRSL1Q9HCM7 1045 aaKnown RBP16.05■□□□□ 0.16
TRIM47-206ENST00000592942 ST7Q9NRC1 585 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 NOCTQ9UK39 431 aaKnown RBP16.05■□□□□ 0.16
TRIM47-206ENST00000592942 SIT1Q9Y3P8 196 aa16.05■□□□□ 0.16
TRIM47-206ENST00000592942 A0A1W2PQC6 194 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 STK25O00506 426 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 MAN2B1O00754 1011 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 STC2O76061 302 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 FBXO21O94952 628 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 DCNP07585 359 aaKnown RBP16.04■□□□□ 0.16
TRIM47-206ENST00000592942 MMEP08473 750 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 GJA4P35212 333 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 PBX1P40424 430 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 STAT1P42224 750 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 IFNAR2P48551 515 aa16.04■□□□□ 0.16
TRIM47-206ENST00000592942 KPNA1P52294 538 aaPredicted RBP16.04■□□□□ 0.16
TRIM47-206ENST00000592942 EFEMP1Q12805 493 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms