RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 VHLP40337 213 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 ATP5OP48047 213 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 OSTNP61366 133 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 TPSAB1Q15661 275 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 CCDC14Q49A88 953 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 TREML2Q5T2D2 321 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 SH3PXD2AQ5TCZ1 1133 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 CAPRIN2Q6IMN6 1127 aaKnown RBP12.06□□□□□ -0.48
ZNF540-210ENST00000592533 ANO7Q6IWH7 933 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 CCDC62Q6P9F0 684 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 RINLQ6ZS11 566 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 TRIM50Q86XT4 487 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 TAB3Q8N5C8 712 aaPredicted RBP12.06□□□□□ -0.48
ZNF540-210ENST00000592533 PRR11Q96HE9 360 aaPredicted RBP12.06□□□□□ -0.48
ZNF540-210ENST00000592533 INO80BQ9C086 356 aaPredicted RBP12.06□□□□□ -0.48
ZNF540-210ENST00000592533 ZFATQ9P243 1243 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 ZC3H7BQ9UGR2 993 aaKnown RBP12.06□□□□□ -0.48
ZNF540-210ENST00000592533 ITGA11Q9UKX5 1188 aa12.06□□□□□ -0.48
ZNF540-210ENST00000592533 SLC15A5A6NIM6 579 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 FCHO1O14526 889 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 BIRC5O15392 142 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 HBP1O60381 514 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 MAGEC1O60732 1142 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 SNNO75324 88 aaPredicted RBP12.05□□□□□ -0.48
ZNF540-210ENST00000592533 AVILO75366 819 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 MYL2P10916 166 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 MRPS35P82673 323 aaKnown RBP12.05□□□□□ -0.48
ZNF540-210ENST00000592533 ORC1Q13415 861 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 HSF5Q4G112 596 aaPredicted RBP12.05□□□□□ -0.48
ZNF540-210ENST00000592533 PKDCCQ504Y2 493 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 STXBP5Q5T5C0 1151 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 MAP1SQ66K74 1059 aaPredicted RBP12.05□□□□□ -0.48
ZNF540-210ENST00000592533 ATG16L1Q676U5 607 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 TIFABQ6ZNK6 161 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 DNAJC9Q8WXX5 260 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 FAM136AQ96C01 138 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 NLRP4Q96MN2 994 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 MPHOSPH6Q99547 160 aaKnown RBP12.05□□□□□ -0.48
ZNF540-210ENST00000592533 IFT122Q9HBG6 1241 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 PCDH18Q9HCL0 1135 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 ALG13Q9NP73 1137 aaKnown RBP12.05□□□□□ -0.48
ZNF540-210ENST00000592533 CXorf49A8MYA2 514 aaPredicted RBP12.05□□□□□ -0.48
ZNF540-210ENST00000592533 E5RJQ4 531 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 KCNN4O15554 427 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 MTM1Q13496 603 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 LBRQ14739 615 aaKnown RBP12.05□□□□□ -0.48
ZNF540-210ENST00000592533 TBCCQ15814 346 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 ACSBG2Q5FVE4 666 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 PRAMEF18Q5VWM3 479 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 OLFML1Q6UWY5 402 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 ZNF534Q76KX8 674 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 NT5DC4Q86YG4 428 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 LMNTD2Q8IXW0 634 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 ARHGAP24Q8N264 748 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 LINC01465Q8N7H1 131 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 PCDH19Q8TAB3 1148 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.05□□□□□ -0.48
ZNF540-210ENST00000592533 HPDLQ96IR7 371 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 IQCGQ9H095 443 aaKnown RBP12.05□□□□□ -0.48
ZNF540-210ENST00000592533 ASCC2Q9H1I8 757 aaPredicted RBP12.05□□□□□ -0.48
ZNF540-210ENST00000592533 SMARCAD1Q9H4L7 1026 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 STX18Q9P2W9 335 aaKnown RBP12.05□□□□□ -0.48
ZNF540-210ENST00000592533 C2CD2Q9Y426 696 aa12.05□□□□□ -0.48
ZNF540-210ENST00000592533 DICER1Q9UPY3 1922 aaKnown RBP12.05□□□□□ -0.48
ZNF540-210ENST00000592533 F8W8V4 182 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 I3L4J1 428 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 GCATO75600 419 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 C22orf31O95567 290 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 SETSIPP0DME0 302 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 CRHR1P34998 444 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 ZBTB16Q05516 673 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 KRT81Q14533 505 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 C15orf59Q2T9L4 293 aaPredicted RBP12.04□□□□□ -0.48
ZNF540-210ENST00000592533 RAB6CQ53S08 254 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 EFCAB12Q6NXP0 572 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 CFAP36Q96G28 342 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 HEXIM2Q96MH2 286 aaKnown RBP12.04□□□□□ -0.48
ZNF540-210ENST00000592533 SIKE1Q9BRV8 207 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 OSBPL1AQ9BXW6 950 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 SLC4A5Q9BY07 1137 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 RAB6CQ9H0N0 254 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 PDZD7Q9H5P4 517 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 SMYD2Q9NRG4 433 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 SCN1AP35498 2009 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 IRF6O14896 467 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 NVLO15381 856 aaKnown RBP12.04□□□□□ -0.48
ZNF540-210ENST00000592533 KRT38O76015 456 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 PSMG1O95456 288 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 ZBED1O96006 694 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 ESRRAP11474 423 aaPredicted RBP12.04□□□□□ -0.48
ZNF540-210ENST00000592533 RBL1P28749 1068 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 PHKA2P46019 1235 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 SERPINB9P50453 376 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 NDST1P52848 882 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 BCAR1P56945 870 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 C1orf228Q6PIY5 440 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 UNC5AQ6ZN44 842 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 PAXIP1Q6ZW49 1069 aaPredicted RBP12.04□□□□□ -0.48
ZNF540-210ENST00000592533 ARCQ7LC44 396 aa12.04□□□□□ -0.48
ZNF540-210ENST00000592533 CDKL3Q8IVW4 592 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms