RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	IGSF10	Q6WRI0	2623 aa		19.37	■□□□□ 0.69
CIRBP-238	ENST00000592412	UBE4B	O95155	1302 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	TBX18	O95935	607 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	CAPNS1	P04632	268 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	CD59	P13987	128 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	NDUFV2	P19404	249 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	NTSR1	P30989	418 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	TRPC3	Q13507	836 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	BTBD8	Q5XKL5	378 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	SCARA5	Q6ZMJ2	495 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	TRMT11	Q7Z4G4	463 aa	Known RBP	19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	C12orf56	Q8IXR9	622 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	MINDY1	Q8N5J2	469 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	CEP76	Q8TAP6	659 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	SYAP1	Q96A49	352 aa	Predicted RBP	19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	DHX58	Q96C10	678 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	C7orf25	Q9BPX7	421 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	CUEDC2	Q9H467	287 aa		19.36	■□□□□ 0.69
CIRBP-238	ENST00000592412	FAM221B	A6H8Z2	402 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	PRRT4	C9JH25	899 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	AP1G2	O75843	785 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	VNN1	O95497	513 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	GFPT1	Q06210	699 aa	Predicted RBP	19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	BMT2	Q1RMZ1	405 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	SHC4	Q6S5L8	630 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	SLC36A4	Q6YBV0	504 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	TOGARAM2	Q6ZUX3	1019 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	HTR3D	Q70Z44	454 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	SMARCD1	Q96GM5	515 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	GABRG3	Q99928	467 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	MED10	Q9BTT4	135 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	KLF16	Q9BXK1	252 aa	Predicted RBP	19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	LRRC27	Q9C0I9	530 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	SLC6A17	Q9H1V8	727 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	UPF2	Q9HAU5	1272 aa	Known RBP	19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	KRT82	Q9NSB4	513 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	OSER1	Q9NX31	292 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	HMGXB4	Q9UGU5	601 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	CYP8B1	Q9UNU6	501 aa		19.35	■□□□□ 0.69
CIRBP-238	ENST00000592412	LRRIQ3	A6PVS8	624 aa	Predicted RBP	19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	TAF4	O00268	1085 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	ARHGAP33	O14559	1287 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	CACNG3	O60359	315 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	TLR5	O60602	858 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	GJB3	O75712	270 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	CCDC130	P13994	396 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	SNRPF	P62306	86 aa	Known RBP	19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	CLDN10	P78369	228 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	RING1	Q06587	406 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	ORC1	Q13415	861 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	ZNF699	Q32M78	642 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	GRAMD4	Q6IC98	578 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	UNC13D	Q70J99	1090 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	GPRIN1	Q7Z2K8	1008 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	ACOT1	Q86TX2	421 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	CHCHD4	Q8N4Q1	142 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	IPO4	Q8TEX9	1081 aa	Known RBP	19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	CSNK1G1	Q9HCP0	422 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	DNAJC17	Q9NVM6	304 aa	Known RBP	19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	COMMD8	Q9NX08	183 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	MARK1	Q9P0L2	795 aa		19.34	■□□□□ 0.69
CIRBP-238	ENST00000592412	ATP8B3	O60423	1300 aa		19.33	■□□□□ 0.69
CIRBP-238	ENST00000592412	NEDD8-MDP1	E9PL57	170 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	SPTLC2	O15270	562 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	OPHN1	O60890	802 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	C4BPA	P04003	597 aa	Known RBP	19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	TYR	P14679	529 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	ATXN3	P54252	364 aa	Predicted RBP	19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	STK38	Q15208	465 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	PREPL	Q4J6C6	727 aa	Predicted RBP	19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	RAB44	Q7Z6P3	723 aa	Predicted RBP	19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	HDDC3	Q8N4P3	179 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	TRIML1	Q8N9V2	468 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	SLC2A14	Q8TDB8	520 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	PARD3B	Q8TEW8	1205 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	TNIP3	Q96KP6	325 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	HSPA12B	Q96MM6	686 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	CAMK1G	Q96NX5	476 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	BLZF1	Q9H2G9	400 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	SLC39A2	Q9NP94	309 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	DNAAF2	Q9NVR5	837 aa	Known RBP	19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	RAD54B	Q9Y620	910 aa		19.33	■□□□□ 0.68
CIRBP-238	ENST00000592412	PHACTR2	O75167	634 aa		19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	PPP6R2	O75170	966 aa		19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	CISD3	P0C7P0	127 aa		19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	AMPD3	Q01432	767 aa		19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	BIRC3	Q13489	604 aa		19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	NCOA4	Q13772	614 aa		19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	ZNF667	Q5HYK9	610 aa		19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	CHPF	Q8IZ52	775 aa		19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	C12orf29	Q8N999	325 aa		19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	ZNF419	Q96HQ0	510 aa	Predicted RBP	19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	MRGPRX1	Q96LB2	322 aa		19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	BBS2	Q9BXC9	721 aa		19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	CYLD	Q9NQC7	956 aa		19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	CACNA2D2	Q9NY47	1150 aa		19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412	TFIP11	Q9UBB9	837 aa	Known RBP	19.32	■□□□□ 0.68
CIRBP-238	ENST00000592412		A0A1W2PQD8	194 aa		19.31	■□□□□ 0.68
CIRBP-238	ENST00000592412	WASH3P	C4AMC7	463 aa		19.31	■□□□□ 0.68

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