RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 KLF16Q9BXK1 252 aaPredicted RBP12.11□□□□□ -0.47
VMP1-211ENST00000591315 MIS12Q9H081 205 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 NAT10Q9H0A0 1025 aaKnown RBP12.11□□□□□ -0.47
VMP1-211ENST00000591315 KIF9Q9HAQ2 790 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 FBRSL1Q9HCM7 1045 aaKnown RBP12.11□□□□□ -0.47
VMP1-211ENST00000591315 LTB4R2Q9NPC1 389 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 NLRC4Q9NPP4 1024 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 TRPV5Q9NQA5 729 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 CYLDQ9NQC7 956 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 THG1LQ9NWX6 298 aaKnown RBP12.11□□□□□ -0.47
VMP1-211ENST00000591315 DLGAP2Q9P1A6 1054 aa12.11□□□□□ -0.47
VMP1-211ENST00000591315 SPECC1L-ADORA2AF8WAN1 911 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 GREM1O60565 184 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 HMBSP08397 361 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 TCF3P15923 654 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 PFKLP17858 780 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 CTHP32929 405 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 IFNAR2P48551 515 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 TUBP50607 506 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 SLC8A3P57103 927 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 DAOAP59103 153 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 EFEMP1Q12805 493 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 PON2Q15165 354 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 GAB4Q2WGN9 574 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 ITPRIPL2Q3MIP1 535 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 FKBP15Q5T1M5 1219 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 TAF3Q5VWG9 929 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 MIB1Q86YT6 1006 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 BBS7Q8IWZ6 715 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 PJA1Q8NG27 643 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 OSCP1Q8WVF1 389 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 KCTD13Q8WZ19 329 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 FAM3CQ92520 227 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 P2RY11Q96G91 374 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 NAP1L5Q96NT1 182 aaPredicted RBP12.1□□□□□ -0.47
VMP1-211ENST00000591315 NACA2Q9H009 215 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 ST7Q9NRC1 585 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 RBM12Q9NTZ6 932 aaKnown RBP12.1□□□□□ -0.47
VMP1-211ENST00000591315 RASAL2Q9UJF2 1139 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 SIT1Q9Y3P8 196 aa12.1□□□□□ -0.47
VMP1-211ENST00000591315 MYO18AQ92614 2054 aaKnown RBP12.09□□□□□ -0.47
VMP1-211ENST00000591315 F8VZ95 297 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 GFPT2O94808 682 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 KLKB1P03952 638 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 HOXC13P31276 330 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 ATP5C1P36542 298 aaKnown RBP12.09□□□□□ -0.47
VMP1-211ENST00000591315 PDE6CP51160 858 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 MESP2Q0VG99 397 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 PDGFRLQ15198 375 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 STILQ15468 1287 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 TAF5Q15542 800 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 BSPRYQ5W0U4 402 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 ZNF852Q6ZMS4 543 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 NOP9Q86U38 636 aaKnown RBP12.09□□□□□ -0.47
VMP1-211ENST00000591315 SCUBE3Q8IX30 993 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 SIX6OS1Q8N1H7 587 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 SLC20A1Q8WUM9 679 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 SHDQ96IW2 340 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 PIWIL1Q96J94 861 aaKnown RBP12.09□□□□□ -0.47
VMP1-211ENST00000591315 FAM81BQ96LP2 452 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 PCMTD1Q96MG8 357 aaPredicted RBP12.09□□□□□ -0.47
VMP1-211ENST00000591315 STK33Q9BYT3 514 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 ECT2Q9H8V3 914 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 SFMBT1Q9UHJ3 866 aa12.09□□□□□ -0.47
VMP1-211ENST00000591315 SMTNL1A8MU46 457 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 E5RJQ4 531 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 PAPSS1O43252 624 aaPredicted RBP12.08□□□□□ -0.48
VMP1-211ENST00000591315 CYP17A1P05093 508 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 FYNP06241 537 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 TPM2P07951 284 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 RALAP11233 206 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 PTMSP20962 102 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 GJA4P35212 333 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 SLC6A11P48066 632 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 RPL34P49207 117 aaKnown RBP12.08□□□□□ -0.48
VMP1-211ENST00000591315 JAM2P57087 298 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 PTK2Q05397 1052 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 TCF15Q12870 199 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 GAS6Q14393 721 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 SKOR2Q2VWA4 1001 aaPredicted RBP12.08□□□□□ -0.48
VMP1-211ENST00000591315 RHBDF2Q6PJF5 856 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 SFTPA1Q8IWL2 248 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 ADGRG2Q8IZP9 1017 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 DTWD2Q8NBA8 298 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 C1orf131Q8NDD1 294 aaKnown RBP12.08□□□□□ -0.48
VMP1-211ENST00000591315 ANKRD20A12PQ8NF67 263 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 DDX1Q92499 740 aaKnown RBP12.08□□□□□ -0.48
VMP1-211ENST00000591315 EZH1Q92800 747 aaPredicted RBP12.08□□□□□ -0.48
VMP1-211ENST00000591315 HSFY1Q96LI6 401 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 ERGIC2Q96RQ1 377 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 CPXM1Q96SM3 734 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 SLC4A5Q9BY07 1137 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 LMAN1LQ9HAT1 526 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 CNGB3Q9NQW8 809 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 POLR3BQ9NW08 1133 aaPredicted RBP12.08□□□□□ -0.48
VMP1-211ENST00000591315 C2orf42Q9NWW7 574 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 CLIC5Q9NZA1 410 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 DNMT3LQ9UJW3 386 aa12.08□□□□□ -0.48
VMP1-211ENST00000591315 SLC12A8A0AV02 714 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 E2F8A0AVK6 867 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms